Gene EcSMS35_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1968 
Symbol 
ID6146308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1992437 
End bp1992898 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID641616844 
Producthypothetical protein 
Protein accessionYP_001744020 
Protein GI170682813 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000843778 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC ACCTGATGAG CGATGTACCT TTCTGGCAAA GTAAAACCCT GGACGAAATG 
AGCGATGCGG AATGGGAGTC GTTGTGTGAT GGTTGCGGTC AGTGTTGCCT GCATAAACTG
ATGGATGAAG ACACCGACGA AATCTACTTC ACTAACGTCG CCTGTCGCCA GCTCAATATT
AAAACCTGTC AATGTCGGAA CTACGAACGT CGTTTCGAGT TTGAACCTGA CTGCATTAAA
TTAACCCGTG AAAATCTGCC AACATTCGAA TGGCTGCCAA TGACCTGCGC TTATCGCTTG
CTGGCGGAAG GTAAAGATTT ACCTGCGTGG CATCCGCTGC TTACTGGTTC GAAAGCGGCA
ATGCATGGCG AACGTATCTC TGTGCGTCAT ATCGCAGTGA AAGAATCAGA AGTGATTGAC
TGGCAGGATC ATATCTTAAA TAAACCTGAC TGGGCGCAGT GA
 
Protein sequence
MAEHLMSDVP FWQSKTLDEM SDAEWESLCD GCGQCCLHKL MDEDTDEIYF TNVACRQLNI 
KTCQCRNYER RFEFEPDCIK LTRENLPTFE WLPMTCAYRL LAEGKDLPAW HPLLTGSKAA
MHGERISVRH IAVKESEVID WQDHILNKPD WAQ