Gene EcSMS35_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1955 
SymbolmltE 
ID6146599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1976081 
End bp1976692 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content52% 
IMG OID641616831 
Productmembrane-bound lytic murein transglycosylase E 
Protein accessionYP_001744007 
Protein GI170683062 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0826912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.211884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTGA GATGGTTTGC CTTTTTGATT GTGTTATTAG CGGGTTGTTC ATCAAAGCAT 
GACTATACGA ACCCGCCGTG GAACGCGAAA GTTCCGGTGC AACGTGCGAT GCAGTGGATG
CCAATAAGCC AGAAAGCCGG TGCAGCCTGG GGCGTCGATC CACAATTGAT CACGGCGATT
ATCGCTATCG AATCGGGTGG TAATCCGAAC GCGGTGAGTA AATCGAATGC CATTGGTTTG
ATGCAGATAA AAGCTTCAAC CTCCGGACGT GATGTATATC GTCGTATGGG CTGGAGTGGT
GAGCCGACGA CCAGCGAGCT GAAAAATCCG GAGCGTAATA TTTCAATGGG AGCGGCTTAC
CTGAATATTC TGGAAACCGG CCCGCTGGCA GGCATTGAAG ATCCGAAGGT ACTGCAATAT
GCGCTGGTGG TGTCATATGC TAACGGGGCA GGTGCGCTGC TACGGACTTT CTCGTCAGAT
CGGAAAAAGG CGATCAGCAA AATCAACGAT CTGGATGCTG ACGAGTTCCT CGATCACGTA
GCGCGAAATC ATCCTGCGCC GCAGGCTCCG CGCTATATCT ACAAACTTGA GCAGGCACTG
GACGCGATGT AA
 
Protein sequence
MKLRWFAFLI VLLAGCSSKH DYTNPPWNAK VPVQRAMQWM PISQKAGAAW GVDPQLITAI 
IAIESGGNPN AVSKSNAIGL MQIKASTSGR DVYRRMGWSG EPTTSELKNP ERNISMGAAY
LNILETGPLA GIEDPKVLQY ALVVSYANGA GALLRTFSSD RKKAISKIND LDADEFLDHV
ARNHPAPQAP RYIYKLEQAL DAM