Gene EcSMS35_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1909 
SymbolpurU 
ID6147441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1929657 
End bp1930499 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content48% 
IMG OID641616785 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_001743963 
Protein GI170683587 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0165731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.142161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCAC TCCAACGTAA AGTTCTGCGT ACTATTTGTC CGGACCAAAA AGGTCTGATC 
GCACGTATCA CCAATATTTG CTACAAGCAC GAGTTAAATA TCGTACAGAA CAATGAATTT
GTTGATCACC GTACCGGGCG CTTTTTTATG CGCACGGAAC TGGAGGGGAT TTTTAATGAT
TCCACCCTGC TGGCGGATCT CGATAGCGCA TTGCCAGAAG GCTCCGTACG TGAGCTGAAT
CCTGCCGGTC GTCGCCGGAT AGTGATTCTG GTCACTAAAG AGGCGCATTG CCTTGGCGAT
TTGTTGATGA AAGCCAATTA CGGCGGCCTG GATGTCGAAA TCGCGGCAGT TATTGGTAAC
CACGATACTT TACGTTCTCT GGTTGAGCGT TTTGATATTC CGTTTGAGCT GGTAAGTCAT
GAAGGATTAA GTCGCAACGA GCACGATCAA AAGATGGCGG ATGCCATTGA TGCTTATCAG
CCTGACTACG TGGTGCTGGC GAAGTATATG CGGGTATTAA CGCCAGAATT TGTGGCACGC
TTCCCGAATA AGATCATCAA TATTCACCAT TCATTCCTGC CAGCGTTTAT CGGCGCACGT
CCTTATCACC AGGCCTATGA ACGTGGCGTG AAGATTATTG GCGCAACCGC TCACTATGTG
AATGACAATC TGGACGAAGG TCCAATCATC ATGCAGGACG TTATTCATGT CGATCATACC
TACACAGCTG AAGATATGAT GCGCGCAGGT CGTGACGTCG AGAAAAACGT CTTAAGTCGC
GCACTCTACA AAGTACTGGC GCAGCGCGTC TTTGTTTACG GTAATCGGAC GATTATTCTT
TAA
 
Protein sequence
MHSLQRKVLR TICPDQKGLI ARITNICYKH ELNIVQNNEF VDHRTGRFFM RTELEGIFND 
STLLADLDSA LPEGSVRELN PAGRRRIVIL VTKEAHCLGD LLMKANYGGL DVEIAAVIGN
HDTLRSLVER FDIPFELVSH EGLSRNEHDQ KMADAIDAYQ PDYVVLAKYM RVLTPEFVAR
FPNKIINIHH SFLPAFIGAR PYHQAYERGV KIIGATAHYV NDNLDEGPII MQDVIHVDHT
YTAEDMMRAG RDVEKNVLSR ALYKVLAQRV FVYGNRTIIL