Gene EcSMS35_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1908 
Symbol 
ID6144085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1929128 
End bp1929607 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content46% 
IMG OID641616784 
Producthypothetical protein 
Protein accessionYP_001743962 
Protein GI170683220 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0591101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.221603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCCAG GGAGATTATT TGTGTCTCAG CTTTGTCCCT GTGGTAGTGC TGTCGAGTAT 
AGCCTATGTT GCCACCCTTA TGTGTCTGGT GAAAAGGTTG CACCTGATCC AGAACATCTC
ATGCGTTCGC GTTACTGCGC TTTTGTGATG CAAGACGCAG ATTATTTAAT AAAGACCTGG
CATCCATCTT GTGGAGCAGC GGCGTTACGT GCCGAATTGA TGGCCGGATT TGCGCATACT
GAATGGTTGG GATTGACCGT ATTTGAACAT TGTTGGCAGG ACGGCGACAA TATCGGATTT
GTCAGTTTTG TTGCTCGATT TACCGAAGGT GGCAAAACAG GTGCAATCAT TGAACGTTCG
CGATTTTTGA AAGAAAACGG TCAATGGTAC TATATTGACG GTACACGTCC GCAGTTTGGC
CGCAACGATC CCTGCCCTTG TGGTTCAGGT AAAAAATTTA AAAAGTGCTG CGGCCAATAA
 
Protein sequence
MFPGRLFVSQ LCPCGSAVEY SLCCHPYVSG EKVAPDPEHL MRSRYCAFVM QDADYLIKTW 
HPSCGAAALR AELMAGFAHT EWLGLTVFEH CWQDGDNIGF VSFVARFTEG GKTGAIIERS
RFLKENGQWY YIDGTRPQFG RNDPCPCGSG KKFKKCCGQ