| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1872 |
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| Symbol | trpA |
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| ID | 6142697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1897190 |
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| End bp | 1897996 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641616748 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001743926 |
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| Protein GI | 170682783 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000234299 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACGCT ACGAATCTCT GTTTGCCCGT TTGAAGGAGC GCAAAGAAGG CGCATTCGTT
CCTTTCGTCA CCCTCGGTGA TCCGGGCATT GAGCAGTCGC TGAAAATTAT CGATGCGCTA
ATTGAAGCCG GTGCTGACGC GCTGGAGTTA GGCATCCCCT TCTCCGACCC ACTGGCAGAT
GGCCCGACGA TTCAAAACGC CACACTGCGT GCCTTTGCGG CAGGTGTGAC CCCGGCGCAG
TGCTTTGAGA TGCTGGCACT CATTCGCCAG AAACACCCGA CCATTCCCAT TGGCCTGCTG
ATGTATGCCA ACCTGGTGTT TAACAAAGGC ATTGATGAGT TTTATGCCCA GTGCGAAAAA
GCCGGCGTCG ATTCGGTGCT GGTTGCCGAT GTGCCCGTGG AAGAGTCCGC GCCCTTCCGC
CAGGCCGCGT TGCGTCATAA TGTCGCACCT ATCTTTATCT GCCCGCCAAA TGCCGATGAC
GACCTGCTGC GCCAGATAGC CTCTTACGGT CGTGGTTACA CCTATTTATT GTCGCGTGCG
GGCGTGACCG GCGCAGAAAA CCGCGCCGCG TTACCCCTCA ATCATCTGGT CACGAAGCTG
AAAGAATACA ATGCTGCGCC TCCATTGCAG GGATTTGGTA TTTCCGCCCC GGATCAGGTA
AAAGCAGCGA TTGATGCAGG AGCTGCGGGC GCGATTTCTG GTTCGGCCAT CGTTAAAATC
ATCGAGCAAC ATATTAATGA GCCAGAGAAA ATGCTGGCGG CACTGAAAGC TTTTGTACAA
CCGATGAAAG CGGCGACGCG CAGTTAA
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| Protein sequence | MERYESLFAR LKERKEGAFV PFVTLGDPGI EQSLKIIDAL IEAGADALEL GIPFSDPLAD
GPTIQNATLR AFAAGVTPAQ CFEMLALIRQ KHPTIPIGLL MYANLVFNKG IDEFYAQCEK
AGVDSVLVAD VPVEESAPFR QAALRHNVAP IFICPPNADD DLLRQIASYG RGYTYLLSRA
GVTGAENRAA LPLNHLVTKL KEYNAAPPLQ GFGISAPDQV KAAIDAGAAG AISGSAIVKI
IEQHINEPEK MLAALKAFVQ PMKAATRS
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