| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1871 |
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| Symbol | trpB |
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| ID | 6143055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1895997 |
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| End bp | 1897190 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641616747 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001743925 |
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| Protein GI | 170683411 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000282354 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACAT TACTTAACCC GTATTTTGGT GAGTTTGGCG GCATGTACGT GCCACAAATC
CTGATGCCTG CTCTGCGCCA GCTGGAAGAA GCTTTTGTCA GTGCGCAAAA AGATCCTGAA
TTTCAGGCTC AGTTCAACGA CCTGCTGAAA AACTATGCCG GGCGTCCAAC CGCGCTGACC
AAATGCCAGA ACATTACAGC CGGGACGAAC ACCACGCTGT ATCTGAAGCG CGAAGATTTG
CTGCACGGCG GCGCGCATAA AACTAACCAG GTGCTGGGAC AGGCGTTGCT GGCGAAGCGG
ATGGGTAAAA CGGAAATCAT CGCCGAAACC GGAGCCGGTC AGCATGGCGT GGCGTCGGCC
CTTGCCAGCG CCCTGCTCGG CCTGAAATGC CGTATTTATA TGGGTGCCAA AGACGTTGAA
CGCCAGTCGC CAAACGTTTT TCGTATGCGC TTAATGGGTG CGGAAGTGAT CCCGGTACAT
AGCGGTTCCG CGACGCTGAA AGATGCCTGT AACGAGGCGC TGCGCGACTG GTCCGGCAGT
TATGAAACCG CGCACTATAT GCTGGGCACC GCAGCTGGCC CACATCCTTA TCCGACCATT
GTCCGTGAGT TTCAGCGAAT GATTGGCGAA GAAACCAAAG CACAGATTCT GGAAAGAGAA
GGTCGCCTGC CGGATGCGGT TATCGCCTGT GTTGGCGGCG GTTCGAATGC CATCGGCATG
TTTGCAGATT TCATCAACGA AACCGACGTC GGCCTGATTG GTGTGGAGCC TGGCGGCCAC
GGTATCGAAA CTGGCGAGCA CGGCGCACCG TTAAAACATG GTCGCGTGGG CATCTATTTC
GGTATGAAAG CGCCGATGAT GCAAACCGAA GACGGGCAAA TTGAAGAGTC TTACTCCATT
TCTGCCGGGC TGGATTTCCC GTCCGTCGGC CCGCAACATG CGTATCTCAA CAGCACTGGA
CGCGCTGATT ACGTGTCTAT TACCGACGAT GAAGCCCTGG AAGCCTTTAA AACGCTTTGC
CTGCATGAAG GGATCATCCC GGCGCTGGAA TCCTCCCACG CCCTGGCCCA TGCGCTGAAA
ATGATGCGCG AAAATCCGGA AAAAGAGCAG CTATTGGTGG TTAACCTTTC CGGTCGCGGC
GATAAAGACA TCTTCACCGT TCACGATATT TTGAAAGCAC GAGGGGAAAT CTGA
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| Protein sequence | MTTLLNPYFG EFGGMYVPQI LMPALRQLEE AFVSAQKDPE FQAQFNDLLK NYAGRPTALT
KCQNITAGTN TTLYLKREDL LHGGAHKTNQ VLGQALLAKR MGKTEIIAET GAGQHGVASA
LASALLGLKC RIYMGAKDVE RQSPNVFRMR LMGAEVIPVH SGSATLKDAC NEALRDWSGS
YETAHYMLGT AAGPHPYPTI VREFQRMIGE ETKAQILERE GRLPDAVIAC VGGGSNAIGM
FADFINETDV GLIGVEPGGH GIETGEHGAP LKHGRVGIYF GMKAPMMQTE DGQIEESYSI
SAGLDFPSVG PQHAYLNSTG RADYVSITDD EALEAFKTLC LHEGIIPALE SSHALAHALK
MMRENPEKEQ LLVVNLSGRG DKDIFTVHDI LKARGEI
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