| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1815 |
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| Symbol | pspD |
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| ID | 6146259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1836235 |
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| End bp | 1836456 |
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| Gene Length | 222 bp |
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| Protein Length | 73 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641616691 |
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| Product | peripheral inner membrane phage-shock protein |
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| Protein accession | YP_001743869 |
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| Protein GI | 170683517 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02979] phage shock protein PspD |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.303275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACTC GCTGGCAACA GGCCGGGCAA AAGGTGAAGC CTGGGTTCAA ATTAGCAGGC
AAGCTGGTAC TTCTTACCGC ACTGCGCTAT GGCCCGGCGG GTGTGGCGGG CTGGGCGATA
AAATCAGTTG CTCGCCGACC GCTGAAAATG TTGCTGGCTG TGGCGCTGGA ACCGCTGTTA
AGTCGGGCTG CCAATAAACT GGCACAGCGT TATAAAAGGT GA
|
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| Protein sequence | MNTRWQQAGQ KVKPGFKLAG KLVLLTALRY GPAGVAGWAI KSVARRPLKM LLAVALEPLL
SRAANKLAQR YKR
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