Gene EcSMS35_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1768 
Symbol 
ID6145048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1783327 
End bp1783650 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID641616644 
Producthypothetical protein 
Protein accessionYP_001743822 
Protein GI170682611 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.453342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA CATTACTTCT TTGTGCATTT CTTGTTGGCT TGGTAAGCAG CAATGTAATG 
GCATTGACTC TGGATGAAGC CAGAACTCAG GGGCGGGTAG GTGAAACATT TTATGGTTAT
CTGGTTGCGC TGAAAACGGA TGCTGAAACA GAGAAATTAG TAACCGACAT TAATGCCGAA
CGTAAAGCGA GTTACCAACA ACTGGCAAAG CAAAATAATG TGTCGGTAGA TGATATCGCG
AGACTGGCGG GGCAAAAGCT CGTATCTCGC GCTAAATCAG GAGAATATGT GCAGGGCATT
AACGGAAAAT GGTTACAGAA ATAA
 
Protein sequence
MKRTLLLCAF LVGLVSSNVM ALTLDEARTQ GRVGETFYGY LVALKTDAET EKLVTDINAE 
RKASYQQLAK QNNVSVDDIA RLAGQKLVSR AKSGEYVQGI NGKWLQK