| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1678 |
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| Symbol | |
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| ID | 6146423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1674518 |
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| End bp | 1676890 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641616554 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001743732 |
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| Protein GI | 170681386 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAG TTCTTATTCC TGGCGTCATT TTATGTGGCG CTGATGTAGC GCAGGCCGTC
GATGACAAAA ATATGTACAT GCATGTTTTT GAAGAGATGA CGGTCTATGC TCCTGTCCCT
GTACCCGTAA ACGGCAACAC GCATTACACC AGTGAAAGCA TCGAGCGTTT ACCGACCGGG
AATGGCAATA TCAGCGATCT GCTGAGAACC AACCCTGCGG TACGCATGGA TTCAACGCAA
AGTACCTCAT TGAACCAGGG AGATATTCGC CCGGAGAAAA TCTCTATTCA CGGTGCGTCG
CCCTACCAGA ATGCCTATTT GATTGACGGT ATTAGTGCAA CGAATAACCT GAACCCAGCG
AATGAGTCCG ATGCCAGTAG TGCAACCAAT ATTAGCGGGA TGTCACAGGG GTATTATCTT
GATGTCAGCT TACTGGACAA TGTGACGCTT TATGACAGTT TTGTGCCGGT TGAATTCGGT
CGCTTCAATG GCGGGGTAAT TGATGCAAAG ATCAAACGCT TCAACGCTGA TGATAGCAGC
GTGAAACTGG GTTATCGCAC TACGCGTTCG GACTGGTTAA CATCGCATAT CGATGAGAAT
AACAAGAGCG CATTTAATCA AGGTTCTTCA GGAAGTACTT ATTACTCTCC AGATTTTAAA
AAGAACTTTT ATACCTTGTC GTTTAATCAG GAACTCGCTG ATAACTTTGG CGTTACCGCC
GGTTTATCGC GCCGCCAGTC TGATATCACC CGCGCGGATT ATGTTTCGAA TGACGGCATT
GTCGCCGGCC GGGCACAGTA TAAAAACGTT ATCGATACTG CATTGAGCAA ATTTACCTGG
TTTGCCAGCG ACCGCTTTAC CCACGATTTA ACCTTAAAAT ATACCGGCTC CAGCCGTGAT
TATAATACCA GCACCTTCCC GGAGTCTGAT CGCGAAATGG GTAATAAATC CTATGGTCTG
GCATGGGATA TGGATACCCA GCTCGCATGG GCCAAACTGC GTACCACCGT TGGTTGGGAT
CATATTAGTG ATTATACCCG TCACGATCAT GACATCTGGT ACACCGAACT TTCATGTACA
TATGGTGATA TTACAGGGCG TTGCACCCGT GGCGGATTAG GACACATTTC CCAGGCTGTA
GATAATTACA CCTTCAAAAC ACGCCTGGAC TGGCAAAAAT TCACCGTGGG TAATGTTTCG
CATCAACCCT ACTTCGGCGC GGAATACATC TATTCCGATG CATGGACTGA ACGCCATAAC
CAGTCTGAAT CCTATGTGAT TAATGCTGCC GGAAAGAAAA CTAACCATAC CATTTACCAT
AAAGGTAAAG GCAGCCTGGG AATTGACAAC TACACGCTGT ATATGGCGGA TCGCATTAGC
TGGCGTAATG TGTCATTAAT GCCCGGCGTG CGGTATGACT ATGACAACTA TCTGTCAAAC
CACAATATCT CCCCGCGCTT TATGACGGAA TGGGATATTT TTGCTGATCA AACCTCAATG
ATTACCGCAG GTTATAACCG TTACTATGGC GGGAATATTC TTGATATGGG ATTACGTGAT
ATCCGCAATA GCTGGACGGA ATCGGTATCA GGCAATAAAA CCCTGACGCG TTATCAGGAT
TTGAAAACGC CTTATAACGA TGAACTGGCA ATGGGGTTGC AGCAGAAAAT CGGTAAGAAC
GTTATTGCGC GTGCAAACTA TGTTTACCGT GAAGCGCATG ATCAAATCAG TAAAAGCAGT
CGTACCGACA GCGCGACTAA AACCACCATT ACTGAATATA ACAACGACGG TAAAACCAAA
ACGCATTCGT TCAACCTCAG TTTTGAACTG GCCGAACCCC TGCATATCAG CCAGGTAGAT
ATTAACCCGC AAATTGTCTT TAGCTATATC AAGAGCAAGG GCAACTTGTC GTTAAACAAT
GGTTATGAGG AGAGCAATAC CGGTGATAAC CAGGTGGTTT ATAACGGTAA TCTGGTCTCT
TACGATAGCG TTCCAGTGGC GGATTTTAAT AATCCATTAA AGATCTCCTT AAACATGGAT
TTCACGCATC AACCGAGCGG GTTGGTGTGG GCGAATACGC TGACCTGGCA AGAAGCGCGT
AAAGCTCGCA TTATCCTGGG TAAGACGAAT GCGCAATACA TCAGCGAATA TTCAGATTAC
AAGCAGTATG TTGACGAAAA ACTGGATAGC AGCCTGACCT GGGACACCCG CTTGTCCTGG
ACGCCACAAT TTCTGAAACA ACAAAACCTG ACGTTCAGTG CCGATATTCT CAATGTACTG
GATAGCAAAA CCGCTGTTGA TACAACGAAT ACCGGTGTGG CGACCTACGC CAGTGGCCGT
ACTTTCTGGC TTGATGTCAG CATGAAATTT TAA
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| Protein sequence | MKRVLIPGVI LCGADVAQAV DDKNMYMHVF EEMTVYAPVP VPVNGNTHYT SESIERLPTG
NGNISDLLRT NPAVRMDSTQ STSLNQGDIR PEKISIHGAS PYQNAYLIDG ISATNNLNPA
NESDASSATN ISGMSQGYYL DVSLLDNVTL YDSFVPVEFG RFNGGVIDAK IKRFNADDSS
VKLGYRTTRS DWLTSHIDEN NKSAFNQGSS GSTYYSPDFK KNFYTLSFNQ ELADNFGVTA
GLSRRQSDIT RADYVSNDGI VAGRAQYKNV IDTALSKFTW FASDRFTHDL TLKYTGSSRD
YNTSTFPESD REMGNKSYGL AWDMDTQLAW AKLRTTVGWD HISDYTRHDH DIWYTELSCT
YGDITGRCTR GGLGHISQAV DNYTFKTRLD WQKFTVGNVS HQPYFGAEYI YSDAWTERHN
QSESYVINAA GKKTNHTIYH KGKGSLGIDN YTLYMADRIS WRNVSLMPGV RYDYDNYLSN
HNISPRFMTE WDIFADQTSM ITAGYNRYYG GNILDMGLRD IRNSWTESVS GNKTLTRYQD
LKTPYNDELA MGLQQKIGKN VIARANYVYR EAHDQISKSS RTDSATKTTI TEYNNDGKTK
THSFNLSFEL AEPLHISQVD INPQIVFSYI KSKGNLSLNN GYEESNTGDN QVVYNGNLVS
YDSVPVADFN NPLKISLNMD FTHQPSGLVW ANTLTWQEAR KARIILGKTN AQYISEYSDY
KQYVDEKLDS SLTWDTRLSW TPQFLKQQNL TFSADILNVL DSKTAVDTTN TGVATYASGR
TFWLDVSMKF
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