| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1641 |
|---|
| Symbol | marC |
|---|
| ID | 6142700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1630225 |
|---|
| End bp | 1630890 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641616517 |
|---|
| Product | multiple drug resistance protein MarC |
|---|
| Protein accession | YP_001743695 |
|---|
| Protein GI | 170680289 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATT TGTTTAAAGC AATAGGCCTG GGGCTGGTGG TGTTACTACC GTTAGCTAAC
CCATTAACAA CTGTCGCGTT ATTTCTTGGC CTGGCAGGCA ACATGAACAG TGCTGAACGT
AATCGTCAGT CGTTGATGGC CTCGGTGTAC GTATTTGCCA TCATGATGGT GGCGTATTAC
GCCGGGCAAC TGGTGATGGA TACATTTGGC ATTTCGATTC CCGGTCTGCG AATTGCAGGC
GGCTTAATCG TCGCGTTTAT CGGTTTTCGG ATGCTCTTTC CGCAACAGAA AGCGATTGAT
TCACCGGAAG CGAAAAGCAA GTCGAAAGAG CTGGAAGATG AACCCAGCGC CAATATTGCT
TTTGTACCAC TGGCAATGCC AAGTACCGCG GGTCCGGGAA CCATAGCGAT GATTATTAGC
TCGGCCTCCA CAGTGCGTCA GAGTTCAACC TTTGCTGATT GGGTACTGAT GGTTGCGCCG
CCGCTGATCT TTTTCCTGGT GGCGGTTATT TTGTGGGGAA GTCTACGCAG CTCTGGCGCA
ATTATGCGGC TGGTGGGTAA GGGGGGCATT GAAGCGATCT CCCGTCTGAT GGGATTCCTG
CTGGTATGTA TGGGGGTGCA GTTTATTATT AACGGCATCC TGGAAATCAT TAAAACGTAC
CACTAA
|
|---|
| Protein sequence | MLDLFKAIGL GLVVLLPLAN PLTTVALFLG LAGNMNSAER NRQSLMASVY VFAIMMVAYY
AGQLVMDTFG ISIPGLRIAG GLIVAFIGFR MLFPQQKAID SPEAKSKSKE LEDEPSANIA
FVPLAMPSTA GPGTIAMIIS SASTVRQSST FADWVLMVAP PLIFFLVAVI LWGSLRSSGA
IMRLVGKGGI EAISRLMGFL LVCMGVQFII NGILEIIKTY H
|
|---|
| |