| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1537 |
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| Symbol | |
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| ID | 6146334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1521737 |
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| End bp | 1522948 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616414 |
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| Product | inner membrane transport protein YdhC |
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| Protein accession | YP_001743592 |
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| Protein GI | 170680618 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0900835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0201427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCTG GGAAAAGATT TTTAGTCTGG CTGGCAGGTT TGAGCGTACT CGGTTTTCTG
GCAACCGATA TGTATCTGCC TGCTTTCGCC GCCATACAGG CCGACCTGCA AACGCCTGCG
TCTGCTGTCA GTGCCAGCCT TAGTCTGTTC CTTGCCGGAT TTGCCGCAGC CCAGCTTCTG
TGGGGGCCGC TCTCCGACCG TTATGGTCGT AAACCGGTAT TATTCATCGG CCTGACAATT
TTTGCGTTAG GTAGTCTGGG GATGCTGTGG GTAGAAAACG CCGCTACGCT GCTGGTATTG
CGTTTTGTAC AGGCTGTGGG TGTCTGCGCC GCGGCGGTTA TCTGGCAAGC GTTAGTGACG
GATTATTATC CTTCACAGAA AGTTAACCGT ATTTTTGCGA CCATCATGCC GCTGGTGGGT
CTATCTCCGG CACTGGCTCC TCTGTTAGGA AGCTGGCTGC TGGTCCATTT TTCCTGGCAG
GCGATTTTCG CCACCCTGTT TGCCATTACC GTGGTGCTGA TTCTGCCTAT TTTCTGGCTC
AAACCCACGA CGAAGGCCCG TAACAATAGT CAGGATGGTC TGACCTTTAC CGACCTGCTA
CGTTCTAAAA CCTATCGCGG CAACGTGCTG ATATATGCGG CCTGTTCAGC CAGTTTTTTT
GCATGGCTGA CCGGCTCACC GTTCATCCTT AGTGAAATGG GTTACAGCCC GGCAGTTATT
GGTTTAAGTT ATGTCCCGCA AACTATCGCG TTTCTGATTG GTGGTTATGG CTGTCGCGCC
GCACTGCAGA AATGGCAAGG CAAGCAGTTA TTACCGTGGT TGCTGGTACT GTTTGCTGTC
AGCGTCATTG CGACCTGGGC TGCGGGCTTC ATTAGCCATG TGTCGCTAGT CGAAATCCTG
ATCCCATTCT GTGTGATGGC GATTGCCAAC GGTGCGATCT ACCCGATTGT TGTCGCTCAG
GCGCTGCGTC CCTTCCCACA TGCAACTGGT CGCGCCGCAG CGTTGCAGAA CACTCTGCAA
CTGGGTCTGT GCTTCCTCGC AAGTCTGGTA GTTTCCTGGC TTATCAGTAT CAGCACGCCA
TTGCTCACCA CCACCAGCGT GATGTTATCA ACAGTAGTGC TGGTCGCTCT GGGTTACATG
ATGCAACGTT GTGAAGAAGT TGGCTGCCAG AATCATGGCA ATGCCGAAGT CGCTCATAGC
GAATCACACT GA
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| Protein sequence | MQPGKRFLVW LAGLSVLGFL ATDMYLPAFA AIQADLQTPA SAVSASLSLF LAGFAAAQLL
WGPLSDRYGR KPVLFIGLTI FALGSLGMLW VENAATLLVL RFVQAVGVCA AAVIWQALVT
DYYPSQKVNR IFATIMPLVG LSPALAPLLG SWLLVHFSWQ AIFATLFAIT VVLILPIFWL
KPTTKARNNS QDGLTFTDLL RSKTYRGNVL IYAACSASFF AWLTGSPFIL SEMGYSPAVI
GLSYVPQTIA FLIGGYGCRA ALQKWQGKQL LPWLLVLFAV SVIATWAAGF ISHVSLVEIL
IPFCVMAIAN GAIYPIVVAQ ALRPFPHATG RAAALQNTLQ LGLCFLASLV VSWLISISTP
LLTTTSVMLS TVVLVALGYM MQRCEEVGCQ NHGNAEVAHS ESH
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