| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1535 |
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| Symbol | ribE |
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| ID | 6147015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1519617 |
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| End bp | 1520258 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616412 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001743590 |
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| Protein GI | 170683708 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0455024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00124186 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTACGG GGATTGTACA GGGCACCGCA AAACTGGTGT CGATTGACGA GAAACCAAAT
TTTCGCACGC ATGTGGTGGA GTTACCCGAC CACATGCTGG ACGGTCTGGA AACCGGTGCT
TCCGTGGCGC ATAACGGTTG CTGCCTGACC GTGACGGAAA TTAACGGCAA CCATGTCAGT
TTTGACCTGA TGAAAGAAAC GTTACGCATT ACTAATCTTG GCGATTTAAA AGTGGGGGAT
TGGGTAAACG TTGAGCGTGC GGCGAAATTC AGCGATGAAA TTGGCGGACA CTTAATGTCA
GGTCATATTA TGACCACCGC TGAAGTAGCG AAAATATTAA CCTCGGAAAA TAATCGTCAG
ATCTGGTTTA AAGTCCAGGA TAGTCAGTTG ATGAAATATA TCCTGTACAA AGGATTTATT
GGCATCGACG GTATTAGCCT GACCGTCGGC GAAGTCACGC CAACGCGTTT TTGCGTCCAT
TTAATTCCGG AAACACTGGA ACGCACGACT CTTGGGAAGA AAAAACTTGG CGCACGCGTC
AACATTGAAA TCGATCCACA AACTCAGGCA GTGGTTGATA CGGTAGAACG TGTGCTGGCG
GCACGAGAAA ATGCCATGAA TCAACCAGGT ACAGAAGCCT GA
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| Protein sequence | MFTGIVQGTA KLVSIDEKPN FRTHVVELPD HMLDGLETGA SVAHNGCCLT VTEINGNHVS
FDLMKETLRI TNLGDLKVGD WVNVERAAKF SDEIGGHLMS GHIMTTAEVA KILTSENNRQ
IWFKVQDSQL MKYILYKGFI GIDGISLTVG EVTPTRFCVH LIPETLERTT LGKKKLGARV
NIEIDPQTQA VVDTVERVLA ARENAMNQPG TEA
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