| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1504 |
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| Symbol | |
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| ID | 6144662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1488208 |
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| End bp | 1489074 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616382 |
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| Product | quinate/shikimate dehydrogenase |
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| Protein accession | YP_001743562 |
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| Protein GI | 170679975 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0010931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGTTA CCGCAAAATA CGAATTGATT GGGTTGATGG CCTATCCCAT CCGCCACAGT
TTATCGCCCG AAATGCAGAA TAAAGCCTTA GAAAAAGCGG GATTGCCATT TACCTATATG
GCCTTTGAAG TGGATAACGA TAGTTTTCCC GCAGCAATTG AAGGATTAAA AGCCCTCAAA
ATGCGTGGAA CTGGTGTGTC GATGCCGAAC AAACAACTGG CGTGTGAATA TGTTGATGAA
TTAACGCCAG CGGCCAAACT GGTGGGTGCC ATCAACACCA TCGTTAATGA TGATGGCTAT
CTGCGTGGCT ATAACACCGA CGGCACGGGT CATATTCGCG CCATTAAAGA GAGCGGTTTT
GATATCAAAG GCAAAACGAT GGTGCTATTA GGGGCCGGTG GTGCCTCAAC GGCAATTGGC
GCGCAGGGGG CAATTGAAGG TTTAAAAGAA ATTAAACTCT TTAACCGTCG GGATGAGTTC
TTCGATAAAG CCCTCGCCTT CGCGCAGCGG GTTAACGAAA ACACCGATTG TGTCGTCACG
GTTACCGATC TCGCCGATCA GCAAGCCTTT GCTGAAGCCC TGGCTTCCGC CGACATTTTA
ACCAATGGCA CAAAAGTGGG TATGAAACCC CTTGAGAATG AATCATTGGT TCATGATATC
AGTCTGTTAC ATCCGGGACT TCTGGTCACT GAATGCGTGT ATAACCCGCA TATGACGAAG
TTATTGCAGC AGGCGCAACA AGCGGGTTGC AAAACGATTG ATGGATACGG CATGTTGTTG
TGGCAAGGGG CTGAACAGTT CACGTTATGG ACTGGCAAAG ATTTCCCTCT GGAATATGTT
AAACAGGTCA TGGGGTTCGG TGCCTGA
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| Protein sequence | MNVTAKYELI GLMAYPIRHS LSPEMQNKAL EKAGLPFTYM AFEVDNDSFP AAIEGLKALK
MRGTGVSMPN KQLACEYVDE LTPAAKLVGA INTIVNDDGY LRGYNTDGTG HIRAIKESGF
DIKGKTMVLL GAGGASTAIG AQGAIEGLKE IKLFNRRDEF FDKALAFAQR VNENTDCVVT
VTDLADQQAF AEALASADIL TNGTKVGMKP LENESLVHDI SLLHPGLLVT ECVYNPHMTK
LLQQAQQAGC KTIDGYGMLL WQGAEQFTLW TGKDFPLEYV KQVMGFGA
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