Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1486 |
Symbol | aroH |
ID | 6145865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1469263 |
End bp | 1470309 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641616364 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001743544 |
Protein GI | 170681321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.803184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAA CTGACGAACT CCGTACTGCG CGTATTGAGA GCCTGGTAAC GCCCGCCGAA CTCGCGCTAC GGTATCCCGT AACGCCTGGC GTCGCCACCC ATGTCACCGA CTCCCGCCGC AGAATTGAAA AAATACTGAA TGGTGAAGAT AAGCGACTGT TGGTCATTAT TGGCCCCTGC TCGATCCACG ATCTCACCGC TGCAATGGAG TACGCCACCC GTCTGCAGTC GCTGCGCAAC CAGTACCAGT CACGGCTGGA AATCGTAATG CGCACCTATT TTGAAAAACC ACGAACTGTT GTCGGCTGGA AAGGACTCAT CTCCGATCCA GATTTAAACG GTAGCTATCG GGTAAATCAC GGTCTGGAGC TGGCGCGCAA ATTACTTTTA CAGGTAAATG AGCTGGGCGT CCCTACCGCG ACTGAGTTCC TCGATATGGT GACCGGTCAG TTTATTGCTG ATTTAATCAG TTGGGGCGCG ATTGGCGCTC GTACTACCGA AAGTCAGATC CACCGCGAAA TGGCTTCAGC ACTCTCCTGT CCGGTAGGTT TTAAAAATGG TACCGATGGC AACACGCGGA TTGCCGTGGA TGCTATCCGC GCAGCCCGCG CCAGCCATAT GTTCCTCTCA CCAGACAAAA ACGGTCAGAT GACCATCTAT CAGACCAGTG GCAACCCGTA TGGCCATATT ATTATGCGTG GCGGCAAAAA ACCGAATTAC CATGCCGATG ATATCGCCGC AGCCTGCGAT ACGCTGCACG AGTTTGATTT ACCTGAACAT CTGGTGGTGG ATTTCAGCCA CGGTAACTGC CAGAAGCAGC ACCGTCGCCA GTTAGAAGTT TGTGAGGATA TTTGTCAGCA AATCCGCAAT GGCTCTACGG CGATTGCTGG AATTATGGCG GAAAGTTTCC TGCGCGAAGG AACGCAAAAA ATCGTCGGCG GTCAGCCGCT CACTTACGGT CAATCGATTA CCGACCCGTG TCTGGGCTGG GAAGATACCG AACGCCTGGT CGAAAAACTC GCCTCTGCGG TTGATACCCG CTTCTGA
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Protein sequence | MNRTDELRTA RIESLVTPAE LALRYPVTPG VATHVTDSRR RIEKILNGED KRLLVIIGPC SIHDLTAAME YATRLQSLRN QYQSRLEIVM RTYFEKPRTV VGWKGLISDP DLNGSYRVNH GLELARKLLL QVNELGVPTA TEFLDMVTGQ FIADLISWGA IGARTTESQI HREMASALSC PVGFKNGTDG NTRIAVDAIR AARASHMFLS PDKNGQMTIY QTSGNPYGHI IMRGGKKPNY HADDIAAACD TLHEFDLPEH LVVDFSHGNC QKQHRRQLEV CEDICQQIRN GSTAIAGIMA ESFLREGTQK IVGGQPLTYG QSITDPCLGW EDTERLVEKL ASAVDTRF
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