Gene EcSMS35_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1481 
SymbolbtuD 
ID6147266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1465186 
End bp1465935 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID641616359 
Productvitamin B12-transporter ATPase 
Protein accessionYP_001743539 
Protein GI170680385 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4138] ABC-type cobalamin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTG TGATGCAGTT ACAGGATGTT GCGGAATCTA CCCGCCTGGG GCCGCTTTCT 
GGCGAGGTTC GGGCTGGGGA GATCCTGCAC CTGGTGGGGC CGAACGGCGC GGGTAAGAGT
ACCTTGCTTG CACGAATGGC CGGAATGACC AGCGGTAAGG GAAGCATTCA GTTCGCGGGG
CAACCACTGG AAGCATGGTC CGCAACAAAA CTCGCGCTGC ATCGCGCCTA TCTTTCACAA
CAGCAGACGC CGCCGTTTGC AATGCCGGTC TGGCACTACC TGACACTGCA TCAGCACGAT
AAAACGCGTA CCGAACTACT GAATGATGTC GCAGGGGCGC TGGCTCTTGA TGACAAACTC
GGACGTAGCA CCAATCAACT TTCCGGCGGC GAATGGCAAC GCGTACGTCT TGCTGCGGTG
GTGCTGCAAA TCACACCACA AGCCAATCCC GCAGGCCAAT TACTACTTCT TGATGAGCCT
ATGAACAGTC TTGATGTTGC GCAACAAAGT GCGTTAGACA AAATTCTGAG CGCGCTGTGT
CAGCAAGGAC TGGCGATTGT GATGAGCAGT CACGATCTCA ACCATACATT GCGTCATGCG
CATCGGGCGT GGTTGCTAAA AGGTGGAAAA ATGCTGGCCA GTGGACGCAG GGAAGAGGTG
CTCACGCCGC CAAATCTGGC GCAGGCCTAT GGGATGAATT TTCGCCGTCT GGATATCGAA
GGTCACAGAA TGCTGATTTC GACCATCTGA
 
Protein sequence
MSIVMQLQDV AESTRLGPLS GEVRAGEILH LVGPNGAGKS TLLARMAGMT SGKGSIQFAG 
QPLEAWSATK LALHRAYLSQ QQTPPFAMPV WHYLTLHQHD KTRTELLNDV AGALALDDKL
GRSTNQLSGG EWQRVRLAAV VLQITPQANP AGQLLLLDEP MNSLDVAQQS ALDKILSALC
QQGLAIVMSS HDLNHTLRHA HRAWLLKGGK MLASGRREEV LTPPNLAQAY GMNFRRLDIE
GHRMLISTI