| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1449 |
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| Symbol | cho |
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| ID | 6142688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1434697 |
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| End bp | 1435584 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616328 |
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| Product | nucleotide excision repair endonuclease |
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| Protein accession | YP_001743508 |
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| Protein GI | 170683911 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.432222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTACGGC GTTTAACTTC TCCGCGGCTC GAATTTGAAG CTGCGGCAAT TTATGAATAT
CCCGAACATT TACGTTCATT CCTTAATGAC TTACCCACCC GACCAGGGGT GTATCTGTTT
CATGGCGAAA GTGACACCAT GCCGCTCTAT ATCGGCAAAA GCATTAACAT CCGCAGTCGG
GTGCTTTCTC ATTTACGCAC CCCTGATGAA GCCGCCATGC TACGGCAATC CCGACGCATC
AGCTGGATAT GTACCGCCGG TGAAATCGGC GCTCTGCTCC TTGAAGCGCG ATTAATCAAA
GAACAACAGC CACTGTTTAA TAAACGCTTG CGGCGAAATC GCCAGCTCTG TGCCTTGCAA
TTAAATGAAA AGCGCGTCGA TGTGGTGTAT GCCAAAGAGG TGGATTTTTC ACGAGCCCCC
AACCTGTTTG GCCTGTTTGC CAATAGGCGC GCAGCTTTGC AAGCATTGCA GACCATCGCT
GATGAACAAA AACTTTGTTA TGGTCTGTTG GGACTGGAGC CGTTAAGTCG CGGTCGTGCA
TGTTTTCGTT CAGCGCTAAA ACGTTGCGCC GGAGCATGCT GCGGTAAAGA GAGCCATGAC
GATCATGCGC TACGTTTGCG CCAGTCTCTG GAGCGTTTGC GGGTGGTGTG TTGGCCTTGG
CAAGGGGCGG TGGCGCTGAA AGAACAGCAC CCGGAAATGA CTCAATATCA TATTATTCAA
AACTGGCTGT GGCTGGGGGC GGTTAATTCG CTGGAAGAAG CGACAATGTT AATTCGGACA
CCCGCCGGGT TTGATCACGA CGGTTATAAA ATTCTTTGTA AGCCGCTGCT TTCCGGTAAC
TATGAAATTA CTGAACTTGA TCCGGCGAAT GACCAGCGAG CCAGTTGA
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| Protein sequence | MVRRLTSPRL EFEAAAIYEY PEHLRSFLND LPTRPGVYLF HGESDTMPLY IGKSINIRSR
VLSHLRTPDE AAMLRQSRRI SWICTAGEIG ALLLEARLIK EQQPLFNKRL RRNRQLCALQ
LNEKRVDVVY AKEVDFSRAP NLFGLFANRR AALQALQTIA DEQKLCYGLL GLEPLSRGRA
CFRSALKRCA GACCGKESHD DHALRLRQSL ERLRVVCWPW QGAVALKEQH PEMTQYHIIQ
NWLWLGAVNS LEEATMLIRT PAGFDHDGYK ILCKPLLSGN YEITELDPAN DQRAS
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