| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1287 |
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| Symbol | araH |
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| ID | 6146473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1275976 |
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| End bp | 1276962 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616165 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_001743345 |
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| Protein GI | 170680269 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00785622 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000000602764 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTCTG TTTCTACATC GGGGTCTGGC GCACCTAAGT CGTCATTCAG CTTCGGGCGT
ATCTGGGATC AGTACGGCAT GCTGGTGGTG TTTGCGGTGC TCTTTATCGC CTGTGCCATT
TTTGTCCCAA ATTTTGCCAC CTTCATTAAT ATGAAAGGGT TGGGCCTGGC AATTTCCATG
TCGGGGATGG TGGCGTGTGG CATGTTGTTC TGCCTTGCTT CCGGTGACTT TGACCTTTCT
GTCGCCTCCG TAATTGCCTG TGCGGGTGTC ACCACGGCGG TGGTTATCAA CCTGACTGAA
AGCCTGTGGA TTGGCGTGGC AGCGGGGTTG CTGCTTGGCA TTCTCTGTGG CCTGGTCAAT
GGCTTTGTTA TCGCCAAACT GAAAATAAAT GCTCTGATCA CAACACTGGC AACGATGCAG
ATTGTTCGAG GTCTGGCGTA CATCATTTCA GACGGTAAAG CGGTCGGTAT CGAAGATGAA
AGCTTCTTTG CCCTTGGTTA CGCTAACTGG TTCGGTCTGC CTGCGCCAAT CTGGCTCACC
GTCGCGTGTC TGATTATCTT TGGTTTGTTG CTGAATAAAA CCACCTTTGG TCGTAACACC
CTGGCGATTG GCGGGAACGA AGAGGCTGCG CGTCTGGCGG GTGTACCGGT TGTTCGCACC
AAAATTATTA TCTTTGTTCT CTCTGGCCTG GTATCTGCGA TAGCCGGAAT TATTCTGGCT
TCACGTATGA CCAGTGGGCA GCCAATGACG TCGATTGGTT ATGAGCTTAT TGTTATCTCC
GCCTGCGTTT TAGGTGGCGT TTCTCTGAAA GGTGGCATCG GAAAAATCTC ATATGTGGTG
GCGGGTATCT TAATTTTAGG CACCGTGGAA AACGCCATGA ACCTGCTTAA TATTTCTCCT
TTCGCGCAGT ACGTGGTTCG CGGCTTAATC CTGCTGGCAG CGGTGATCTT CGACCGTTAC
AAGCAAAAAG CGAAACGCAC TGTCTGA
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| Protein sequence | MSSVSTSGSG APKSSFSFGR IWDQYGMLVV FAVLFIACAI FVPNFATFIN MKGLGLAISM
SGMVACGMLF CLASGDFDLS VASVIACAGV TTAVVINLTE SLWIGVAAGL LLGILCGLVN
GFVIAKLKIN ALITTLATMQ IVRGLAYIIS DGKAVGIEDE SFFALGYANW FGLPAPIWLT
VACLIIFGLL LNKTTFGRNT LAIGGNEEAA RLAGVPVVRT KIIIFVLSGL VSAIAGIILA
SRMTSGQPMT SIGYELIVIS ACVLGGVSLK GGIGKISYVV AGILILGTVE NAMNLLNISP
FAQYVVRGLI LLAAVIFDRY KQKAKRTV
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