| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1090 |
|---|
| Symbol | |
|---|
| ID | 6142679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1105889 |
|---|
| End bp | 1106608 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641615975 |
|---|
| Product | aspartate racemase |
|---|
| Protein accession | YP_001743167 |
|---|
| Protein GI | 170683881 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1794] Aspartate racemase |
|---|
| TIGRFAM ID | [TIGR00035] aspartate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGGTT TAATCGGTGT GCTCGGTGGA ATGGGGCCGG CCGCCACTGT CGACTTATTT
AATAAATTTG TCACCTTTAC AGCAGCACAA CGAGATCAAG AACATATACC TTTAATTATT
TCTTCTATCC CGGATATTCC TGACCGTACC GATGCATTAA TGCATAACGG GCTCTCGCCT
TTACCCGTTA TGCGTGACTA TATGCATAAA CTGGAAGATG CAGGAGCAGA ATGTATTGTT
ATTCCCTGTA ATACCGCACA CTATTGGTTT AAAGAACTAA AAGATGCTTG CCATATTGAT
ATACTAAGTA TCATAGATAC TACGGTCGAT GAAGTTCGCG TCTGTGGTAA AACTAGAATT
GGCCTCCTGG CCACTGATGC CACGCTGTAT ATGGGATTAT ACCAGAAAGG AATTGAATCG
TTAGGGTTTA ACTATATCAC CCCGGATGCA GATGGCCAAA AAAATGTGAT GAAAAGCATT
TATTCACTTA AAGCGGGAAA TGTTACACAT GCGCAAAAAT TGATGGAAGA GCAGGCTGAA
AATTTATTTT CCCGCGGAGC AGAGATCTTG ATTCTTGGTT GTACGGAAAT TCCCATTATT
CTGTCACAAG CCGTTAAAGA TCAACCTTTA CGCTATATTG ATTCAACCGC TTCACTCGTT
CGCGCAGGAA TAAAATGGTA TGAAAATCGT ATCGGAAAAG ATCAACATTT AACTCAATAA
|
|---|
| Protein sequence | MKGLIGVLGG MGPAATVDLF NKFVTFTAAQ RDQEHIPLII SSIPDIPDRT DALMHNGLSP
LPVMRDYMHK LEDAGAECIV IPCNTAHYWF KELKDACHID ILSIIDTTVD EVRVCGKTRI
GLLATDATLY MGLYQKGIES LGFNYITPDA DGQKNVMKSI YSLKAGNVTH AQKLMEEQAE
NLFSRGAEIL ILGCTEIPII LSQAVKDQPL RYIDSTASLV RAGIKWYENR IGKDQHLTQ
|
|---|
| |