Gene EcSMS35_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1004 
Symbol 
ID6145815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1023011 
End bp1023499 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content55% 
IMG OID641615891 
Productputative colanic acid biosynthesis acetyltransferase WcaB 
Protein accessionYP_001743083 
Protein GI170682182 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.89582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAG ATCTGCGCGC CAACAGCTGG AGTTTACGTC CGTGCTGCAT GGTTCTTGCC 
TATCGCGTCG CTCATTTTTG TTCGGTGTGG CGCAAAAAGA ACGTCCTCAA CAATCTGTGG
GCGGCCCCGC TGCTGGTGCT GTATCGCATT ATCACCGAAT GCTTTTTCGG TTATGAAATC
CAGGCCGCCG CGACCATTGG CCGCCGTTTC ACTATCCATC ACGGTTACGC CGTGGTGATC
AATAAAAACG TGGTCGCGGG GGATGATTTC ACCATTCGTC ACGGCGTCAC TATCGGCAAT
CGTGGTGCCG ATAACATGGC ATGTCCACAC ATTGGCAACG GCGTCGAACT CGGTGCCAAC
GTCATTATTC TTGGTGATAT CACGCTTGGT AACAACGTCA CCGTGGGCGC GGGCAGCGTG
GTGCTCGACT CTGTCCCGGA CAACGCGCTG GTGGTGGGAG AAAAAGCGCG AGTGAAGGTA
ATTAAATGA
 
Protein sequence
MLEDLRANSW SLRPCCMVLA YRVAHFCSVW RKKNVLNNLW AAPLLVLYRI ITECFFGYEI 
QAAATIGRRF TIHHGYAVVI NKNVVAGDDF TIRHGVTIGN RGADNMACPH IGNGVELGAN
VIILGDITLG NNVTVGAGSV VLDSVPDNAL VVGEKARVKV IK