Gene EcSMS35_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0989 
Symbol 
ID6146228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1003301 
End bp1003822 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content39% 
IMG OID641615876 
Producthypothetical protein 
Protein accessionYP_001743068 
Protein GI170682554 
COG category[S] Function unknown 
COG ID[COG3779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.967035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.180988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACT TCCACAGGTT TTTTGCTAAC TTTTACTACA CAGGGATTCT GGAGAAAAAA 
ATGAAAAAGA TATTACTTAT GTTGAGTCTG CTATTTTTTA CTACCGCAAG CTATTGTGAG
ATTTCGGATA CGTTAGTGAC AGGAGGTTAT GATAAAAAGG CGATGTCTGA CGCGATTAAA
CATGCGCGGA AAGAAACCGA TCAATTCATC GAAGTTATGA ATAAAAAAGA TGCTGATACT
TTCGCAGTCA AAGCCCCGAT AACCGATCGC GGAGAAACCG AGCATTTCTG GCTCACGGAT
GTCACTTATT CTAACGGCAT GTTTATTGGT ATAATAAGCA ATGACCCTGG TATTGTTACA
AACGTAGAAT ATGGCCAGGA GTGGAAAATC AAGAAAGAAG ATATTTCAGA CTGGATGTAT
ACGCGCGGGG ATAAAATTTA CGGTGGTTAT ACCATTGATC CTTTATTGGT CACCTATCCA
AAAGAAGAAG CCGACGAGCT AAGAGCAAAA TTAGTTCGCT AG
 
Protein sequence
MIHFHRFFAN FYYTGILEKK MKKILLMLSL LFFTTASYCE ISDTLVTGGY DKKAMSDAIK 
HARKETDQFI EVMNKKDADT FAVKAPITDR GETEHFWLTD VTYSNGMFIG IISNDPGIVT
NVEYGQEWKI KKEDISDWMY TRGDKIYGGY TIDPLLVTYP KEEADELRAK LVR