Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0989 |
Symbol | |
ID | 6146228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1003301 |
End bp | 1003822 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641615876 |
Product | hypothetical protein |
Protein accession | YP_001743068 |
Protein GI | 170682554 |
COG category | [S] Function unknown |
COG ID | [COG3779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.967035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.180988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCACT TCCACAGGTT TTTTGCTAAC TTTTACTACA CAGGGATTCT GGAGAAAAAA ATGAAAAAGA TATTACTTAT GTTGAGTCTG CTATTTTTTA CTACCGCAAG CTATTGTGAG ATTTCGGATA CGTTAGTGAC AGGAGGTTAT GATAAAAAGG CGATGTCTGA CGCGATTAAA CATGCGCGGA AAGAAACCGA TCAATTCATC GAAGTTATGA ATAAAAAAGA TGCTGATACT TTCGCAGTCA AAGCCCCGAT AACCGATCGC GGAGAAACCG AGCATTTCTG GCTCACGGAT GTCACTTATT CTAACGGCAT GTTTATTGGT ATAATAAGCA ATGACCCTGG TATTGTTACA AACGTAGAAT ATGGCCAGGA GTGGAAAATC AAGAAAGAAG ATATTTCAGA CTGGATGTAT ACGCGCGGGG ATAAAATTTA CGGTGGTTAT ACCATTGATC CTTTATTGGT CACCTATCCA AAAGAAGAAG CCGACGAGCT AAGAGCAAAA TTAGTTCGCT AG
|
Protein sequence | MIHFHRFFAN FYYTGILEKK MKKILLMLSL LFFTTASYCE ISDTLVTGGY DKKAMSDAIK HARKETDQFI EVMNKKDADT FAVKAPITDR GETEHFWLTD VTYSNGMFIG IISNDPGIVT NVEYGQEWKI KKEDISDWMY TRGDKIYGGY TIDPLLVTYP KEEADELRAK LVR
|
| |