| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0973 |
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| Symbol | gatD |
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| ID | 6142996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 983209 |
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| End bp | 984249 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641615860 |
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| Product | galactitol-1-phosphate dehydrogenase |
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| Protein accession | YP_001743052 |
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| Protein GI | 170680364 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.465963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAG TGGTGAATGA TACTGATGGT ATCGTGCGCG TAGCAGAAAG CGTCATTCCT
GAAATTAAAC ATCAGGATGA GGTGCGGGTA AAAATTGCCA GCTCGGGCTT ATGTGGTTCC
GATTTACCCA GGATATTTAA AAATGGTGCA CATTATTATC CAATAACGTT AGGCCATGAA
TTTAGCGGCT ATATTGATGC GGTGGGATCC GGTATTGATG ATTTACATCC CGGCGATGCG
GTTGCCTGTG TGCCGTTATT ACCCTGTTTT ACTTGTCCAG AGTGTCTGAA AGGGTTTTAT
TCCCAGTGCG CAAAATATGA TTTTATTGGC TCACGGCGTG ATGGTGGATT TGCCGAATAT
ATTGTCGTTA AGCGAAACAA TGTCTTTGCA CTACCTGCGG ATATGCCTAT TGAGGATGGC
GCTTTTATTG AACCGATTAC CGTTGGCCTG CATGCGTTCC ATTTAGCGCA AGGATGTGAG
AATAAAAACG TTATTATTAT TGGTGCCGGA ACCATTGGCC TGCTGGCAAT TCAGTGCGCT
GTCGCGCTGG GAGCAAAGAG TGTGACGGCT ATCGACATTA GCTCAGAAAA ACTGGCACTG
GCAAAATCTT TCGGTGCGAT GCAAACATTT AACAGCCGTG AAATGAGCGC GCCGCAAATA
CAGGGCGTTT TACGCGAGCT GCGCTTTAAT CAGCTTATCC TCGAGACGGC TGGCGTCCCG
CAAACCGTCG AACTGGCGGT AGAGATTGCC GGTCCTCATG CCCAACTGGC GCTGGTGGGC
ACGTTGCATC AGGATCTGCA TTTAACATCG GCAACGTTTG GCAAAATATT GCGTAAAGAG
CTGACGGTGA TTGGCAGTTG GATGAACTAC TCCAGCCCTT GGCCGGGGCA GGAGTGGGAA
ACGGCGAGCC GGTTGCTGAC AGAACGTAAG TTAAGCCTGG AGCCATTAAT CGCTCACCGT
GGAAGCTTTG AAAGCTTCGC CCAGGCGGTG CGTGACATCG CTCGTAATGC TATGCCGGGC
AAAGTGTTGC TCATTCCCTG A
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| Protein sequence | MKSVVNDTDG IVRVAESVIP EIKHQDEVRV KIASSGLCGS DLPRIFKNGA HYYPITLGHE
FSGYIDAVGS GIDDLHPGDA VACVPLLPCF TCPECLKGFY SQCAKYDFIG SRRDGGFAEY
IVVKRNNVFA LPADMPIEDG AFIEPITVGL HAFHLAQGCE NKNVIIIGAG TIGLLAIQCA
VALGAKSVTA IDISSEKLAL AKSFGAMQTF NSREMSAPQI QGVLRELRFN QLILETAGVP
QTVELAVEIA GPHAQLALVG TLHQDLHLTS ATFGKILRKE LTVIGSWMNY SSPWPGQEWE
TASRLLTERK LSLEPLIAHR GSFESFAQAV RDIARNAMPG KVLLIP
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