Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0890 |
Symbol | artQ |
ID | 6143849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 893931 |
End bp | 894647 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641615778 |
Product | arginine transporter permease subunit ArtQ |
Protein accession | YP_001742970 |
Protein GI | 170680675 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.125832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT TTTTTCCTTT AGCAAGCGCC GCCGGGATGA CCGTCGGCCT TGCCGTTTGT GCATTGATTG TCGGGCTGGC GCTGGCGATG TTCTTTGCGG TATGGGAGTC GGCAAAATGG CGTCCTGTCG CGTGGGCAGG TTCAGCGCTG GTAACCATTC TGCGTGGCCT GCCAGAAATT CTGGTGGTGC TGTTTATCTA TTTTGGCTCC TCGCAGCTGC TGCTGACGCT TTCGGATGGC TTCACTATCA ATCTTGGGTT CGTGCAAATC CCGGTGCAGA TGGACATTGA GAACTTCGAC GTTAGCCCGT TCCTTTGTGG TGTCATCGCT CTGTCGCTGC TGTATGCCGC CTATGCCTCG CAAACGCTGC GCGGCGCGTT GAAAGCGGTG CCGGTGGGCC AGTGGGAATC CGGACAGGCG CTGGGGCTGT CGAAATCGGC TATCTTTTTC CGTCTGGTGA TGCCGCAGAT GTGGCGTCAT GCGCTGCCTG GTCTCGGTAA CCAGTGGCTG GTGCTGCTGA AAGATACCGC GCTGGTCAGT TTGATAAGCG TGAATGATTT AATGCTACAA ACCAAAAGCA TTGCTACTCG TACCCAGGAA CCATTTACCT GGTACATTGT GGCGGCGGCG ATTTACCTGG TGATCACCCT GCTCAGTCAG TACATTCTCA AACGCATTGA CCTGCGCGCG ACACGTTTTG AGCGGAGGCC CAGCTAA
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Protein sequence | MNEFFPLASA AGMTVGLAVC ALIVGLALAM FFAVWESAKW RPVAWAGSAL VTILRGLPEI LVVLFIYFGS SQLLLTLSDG FTINLGFVQI PVQMDIENFD VSPFLCGVIA LSLLYAAYAS QTLRGALKAV PVGQWESGQA LGLSKSAIFF RLVMPQMWRH ALPGLGNQWL VLLKDTALVS LISVNDLMLQ TKSIATRTQE PFTWYIVAAA IYLVITLLSQ YILKRIDLRA TRFERRPS
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