Gene EcSMS35_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0890 
SymbolartQ 
ID6143849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp893931 
End bp894647 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID641615778 
Productarginine transporter permease subunit ArtQ 
Protein accessionYP_001742970 
Protein GI170680675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.125832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAT TTTTTCCTTT AGCAAGCGCC GCCGGGATGA CCGTCGGCCT TGCCGTTTGT 
GCATTGATTG TCGGGCTGGC GCTGGCGATG TTCTTTGCGG TATGGGAGTC GGCAAAATGG
CGTCCTGTCG CGTGGGCAGG TTCAGCGCTG GTAACCATTC TGCGTGGCCT GCCAGAAATT
CTGGTGGTGC TGTTTATCTA TTTTGGCTCC TCGCAGCTGC TGCTGACGCT TTCGGATGGC
TTCACTATCA ATCTTGGGTT CGTGCAAATC CCGGTGCAGA TGGACATTGA GAACTTCGAC
GTTAGCCCGT TCCTTTGTGG TGTCATCGCT CTGTCGCTGC TGTATGCCGC CTATGCCTCG
CAAACGCTGC GCGGCGCGTT GAAAGCGGTG CCGGTGGGCC AGTGGGAATC CGGACAGGCG
CTGGGGCTGT CGAAATCGGC TATCTTTTTC CGTCTGGTGA TGCCGCAGAT GTGGCGTCAT
GCGCTGCCTG GTCTCGGTAA CCAGTGGCTG GTGCTGCTGA AAGATACCGC GCTGGTCAGT
TTGATAAGCG TGAATGATTT AATGCTACAA ACCAAAAGCA TTGCTACTCG TACCCAGGAA
CCATTTACCT GGTACATTGT GGCGGCGGCG ATTTACCTGG TGATCACCCT GCTCAGTCAG
TACATTCTCA AACGCATTGA CCTGCGCGCG ACACGTTTTG AGCGGAGGCC CAGCTAA
 
Protein sequence
MNEFFPLASA AGMTVGLAVC ALIVGLALAM FFAVWESAKW RPVAWAGSAL VTILRGLPEI 
LVVLFIYFGS SQLLLTLSDG FTINLGFVQI PVQMDIENFD VSPFLCGVIA LSLLYAAYAS
QTLRGALKAV PVGQWESGQA LGLSKSAIFF RLVMPQMWRH ALPGLGNQWL VLLKDTALVS
LISVNDLMLQ TKSIATRTQE PFTWYIVAAA IYLVITLLSQ YILKRIDLRA TRFERRPS