| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0858 |
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| Symbol | |
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| ID | 6146660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 864657 |
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| End bp | 867005 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641615746 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001742938 |
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| Protein GI | 170681940 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTT TATACGAAAA GATAAAGATA AGGCTGATAA TTTTATTTTT ATTGGCAGCA
CTGTCATTTA TTGGTCTTTT TTTCATCATT AACTATCAAC TGGTATCGGA ACGCGCGGTA
AAACGTGCCG ATAGCCGCTT TGAACTTATT CAGAAAAACG TTGGCTATTT CTTTAAAGAT
ATTGAACGTT CGGCCCTGAC ATTAAAGGAC TCACTATATT TATTAAAAAA TACAGAGGAG
ATTCAACGCG CCGTAATTCT GAAAATGGAA ATGATGCCAT TTTTAGACTC GGTGGGACTG
GTACTTGATG ATAATAAATA TTATCTCTTT TCGCGGAGGA CGAATGATAA AATCGTTGTT
TATCATCAGG AACAAGTAAA TGGACCGCTT GTCGACGAGT CAGGGCGGGT TATTTTTGCC
GATTTTAACC CATCGAAACG ACCGTGGTCG GTGGCTTCAG ATGACTCTAA CAACAGCTGG
TATCCGGCAT ACAATTGCTT TGATCGTCCG GGTAAAAAAT GTATCTCTTT TACGCTACGC
ATCAACGGCA AAGATCACGA TTTGTTAGCG GTGGATAAAA TACATGTCGA TTTAAACTGG
CGATATCTGA ACGAGTATCT TGATCACATC AGCGCTAATG ATGAAGTTCT ATTTTTGAAA
CAAGGCCATG AGATCATTGC CAAGAATCAA CTCGCGCGTG AAAAACTGAT TATTTATAAT
AGCGAAGGTA ATTATAATAT TATTGATTCT GTCGATACTG AATATATCGA AAAAACATCA
GTGGTGCCAA ACAACGCATT ATTCGAAATC TATTTTTATT ATCCTGGCGG TAATTTATTG
AACGCATCAG ATAAACTTTT TTATCTGCCG TTTGCGTTCA TTATTATCGT ATTGTTGGTG
GTTTATTTAA TGACCACTCG TGTGTTCCGT CGGCAATTTT CTGAAATGAC CGAGCTGGTT
AATACGCTGG CGTTTTTGCC CGACTCAACG GATCAGATCG AGGCTCTGAA AATTCGCGAA
GGCGATGCGA AAGAGATTAT CAGCATCAAA AATTCGATCG CGGAAATGAA AGATGCCGAA
ATTGAACGGT CAAATAAATT GCTCTCACTG ATCTCTTACG ATCAGGAAAG CGGTTTTATT
AAAAATATGG CGATTATTGA GTCCAACAAT AATCAGTATC TGGCTGTGGG GATCATCAAA
CTGTGTGGTC TGGAAGCCGT GGAAGCGGTG TTTGGTGTTG ATGAACGCAA TAAAATCGTC
AGAAAATTGT GTCAGCGAAT TGCCGAGAAA TATGCGCAAT GCTGCGATAT CGTGACATTT
AATGCCGATC TCTATTTACT CCTGTGCCGG GAAAATGTAC AGACGTTTAC CCGTAAGATA
GCGACGGTAA ACGATTTTGA CAGCAGTTTT GGCTACCGCA ATCTGCGCAT CCATAAGTCT
GCTATTTGTG AACCTTTGCA GGGGGAAAAC GCCTGGAGTT ACGCAGAAAA GCTGAAACTG
GCGATTTCCA GTATCCGCAA CCATATGTTC TCAGAGTTTA TTTTCTGTGA TGATGCGAAA
CTCAACGAAA TAGAAGAGAA TATCTGGATT GCGCGTAATA TTCGCCATGC AATGGAAATT
GGCGAACTAT TCCTCGTCTA TCAACCGATC GTTGATATTA ACACCCGCGC CATTCTGGGC
GCGGAGGCGT TGTGCCGTTG GGTGTCTGCG GAGCGGGGGA TCATTTCACC GCTAAAGTTC
ATTACCATTG CTGAAGATAT CGGGTTTATC AATGAGCTGG GTTATCAGAT TATTAAAACC
GCGATGGGTG AATTCAGACA TTTTAGTCAG CGTGCGGTCC TGAAGGACGG TTTCTTACTG
CATATTAATG TTTCGCCCTG GCAGTTAAAC GAACCACACT TTCATGAGCG TTTTACCACC
ATCATGGAAG AAAATGGCCT GAAGGTGAAC AGCCTCTGTG TTGAGATCAC TGAAACCGTG
ATTGAGCGAA TTAATGAACA TTTTTATCTC AATATTGAAC AACTGCGTAA ACAAGGGGTA
CGGATATCGA TTGATGACTT TGGCACCGGT TTGTCAAACC TGAAACGTTT TTATGAAATT
AATCCAGATA GCATAAAAGT GGACTCACAA TTTACCGGCG ATATTTTCGG TACTGCGGGA
AAAATTGTGC GCATTATTTT CGATCTGGCA CGCTATAACC GGATCCCGGT GATTGCGGAA
GGCGTAGAGA GCGAAGACGT TGCGCGCGAA TTAATCAAAT TAGGATGTGT TCAGGCTCAG
GGGTATCTGT ACCAGAAACC CATGCCGTTC TCCGCCTGGG ATAAAAGTGG AAAATTAGTA
AAAGAGTAG
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| Protein sequence | MLSLYEKIKI RLIILFLLAA LSFIGLFFII NYQLVSERAV KRADSRFELI QKNVGYFFKD
IERSALTLKD SLYLLKNTEE IQRAVILKME MMPFLDSVGL VLDDNKYYLF SRRTNDKIVV
YHQEQVNGPL VDESGRVIFA DFNPSKRPWS VASDDSNNSW YPAYNCFDRP GKKCISFTLR
INGKDHDLLA VDKIHVDLNW RYLNEYLDHI SANDEVLFLK QGHEIIAKNQ LAREKLIIYN
SEGNYNIIDS VDTEYIEKTS VVPNNALFEI YFYYPGGNLL NASDKLFYLP FAFIIIVLLV
VYLMTTRVFR RQFSEMTELV NTLAFLPDST DQIEALKIRE GDAKEIISIK NSIAEMKDAE
IERSNKLLSL ISYDQESGFI KNMAIIESNN NQYLAVGIIK LCGLEAVEAV FGVDERNKIV
RKLCQRIAEK YAQCCDIVTF NADLYLLLCR ENVQTFTRKI ATVNDFDSSF GYRNLRIHKS
AICEPLQGEN AWSYAEKLKL AISSIRNHMF SEFIFCDDAK LNEIEENIWI ARNIRHAMEI
GELFLVYQPI VDINTRAILG AEALCRWVSA ERGIISPLKF ITIAEDIGFI NELGYQIIKT
AMGEFRHFSQ RAVLKDGFLL HINVSPWQLN EPHFHERFTT IMEENGLKVN SLCVEITETV
IERINEHFYL NIEQLRKQGV RISIDDFGTG LSNLKRFYEI NPDSIKVDSQ FTGDIFGTAG
KIVRIIFDLA RYNRIPVIAE GVESEDVARE LIKLGCVQAQ GYLYQKPMPF SAWDKSGKLV
KE
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