| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0578 |
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| Symbol | |
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| ID | 6147199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 586224 |
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| End bp | 587231 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641615470 |
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| Product | mannose binding protein FimH-like protein |
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| Protein accession | YP_001742677 |
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| Protein GI | 170683627 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAA TCTGCAGATT ATTATTGGCA ATGGCATGTT TGTGTCTGGC AAACATATCC
TGGGCTACTG TTTGTGCAAA TAGTACTGGC GTAGCAGAAG ATGAACACTA TGATCTCTCA
AATGTCTTTA ATAGCACCAA TAACCAGCCA GGGCAGATTG TTGTTTTACC GGAAAAATCC
GGCTGGGTAG GTGTATCAGC AATTTGTCCA CCCGGCACGC TGGTGAATTA TACATACCGT
AGTTATGTCA CCAACTTTAT TGTTCAGGAA ACTATCGATA ATTATAAATA TATGCAATTA
AATGATTATC TATTAGGTGC GATGAGTCTG GTTGATAGCG TGATGGATAT TCAATTCCCT
CCGCAAAATT ATATTCGTAT GGGAACAGAT CCTAACGTTT CGCAAAACCT TCCGTTCGGG
GTGATGGATT CTCGTTTGAT ATTTCGTTTA AAGGTTATTC GTCCCTTTAT TAACATGGTG
GAGATCCCCA GACAGGTGAT GTTTACCGTG TATGTGACAT CAACGCCTAA CGATCCGTTG
GTTACACCTG TTTATACCAT TAGTTTTGGT GGCCGGGTTG AAGTACCGCA AAACTGCGAA
TTAAATGCCG GGCAAATTGT TGAATTTGAT TTTGGTGATA TCGGCGCATC GTTATTTAGT
GCGGCAGGGC CGGGGAATCG ACCAGCTGGT GTCATGCCGC AAACCAAGAG CATTGCGATC
AAATGTACGA ATGTTGCTGC GCAGGCTTAT TTAACAATGC GTCTGGAAGC CAGTGCCGTT
TCTGGTCAGG CGATGGTGTC GGACAATCAG GATTTAGGTT TTATTGTGGC CGATCAGAAC
GATACGCCGA TCACGCCTAA CGATCTCAAT AGCGTTATTC CTTTCCGTCT GGATGCAGCT
GCGGCAGCCA ATGTCACACT TCGCGCCTGG CCTATCAGTA TTACCGGTCA AAAACCGACC
GAAGGGCCGT TTAGCGCGCT GGGGTATTTA CGCGTCGATT ATCAATGA
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| Protein sequence | MKIICRLLLA MACLCLANIS WATVCANSTG VAEDEHYDLS NVFNSTNNQP GQIVVLPEKS
GWVGVSAICP PGTLVNYTYR SYVTNFIVQE TIDNYKYMQL NDYLLGAMSL VDSVMDIQFP
PQNYIRMGTD PNVSQNLPFG VMDSRLIFRL KVIRPFINMV EIPRQVMFTV YVTSTPNDPL
VTPVYTISFG GRVEVPQNCE LNAGQIVEFD FGDIGASLFS AAGPGNRPAG VMPQTKSIAI
KCTNVAAQAY LTMRLEASAV SGQAMVSDNQ DLGFIVADQN DTPITPNDLN SVIPFRLDAA
AAANVTLRAW PISITGQKPT EGPFSALGYL RVDYQ
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