| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0553 |
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| Symbol | |
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| ID | 6146612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 560822 |
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| End bp | 562276 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641615447 |
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| Product | allantoin permease |
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| Protein accession | YP_001742654 |
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| Protein GI | 170680776 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.962113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATC AGAGAAAACT ATTCCAGCAA CGCGGCTATA GCGAAGATCT ATTGCCGAAA
ACGCAAAGCC AGCGGACCTG GAAAACATTT AACTATTTTA CCTTATGGAT GGGTTCGGTT
CATAACGTTC CCAATTATGT GATGGTCGGC GGCTTTTTTA TTCTCGGCTT GTCTACCTTT
AGTATTATGC TGGCAATTAT CCTCAGCGCC TTTTTCATTG CCGCGGTAAT GGTATTAAAC
GGTGCTGCGG GCAGTAAATA CGGTGTGCCT TTTGCCATGA TCCTGCGTGC TTCTTACGGC
GTACGTGGTG CACTGTTTCC CGGATTATTA AGAGGCGGGA TTGCTGCCAT TATGTGGTTT
GGCCTGCAAT GTTACGCTGG ATCGCTGGCC TGCTTGATCC TGATTGGCAA AATCTGGCCG
GGATTTTTAA CTCTCGGTGG TGATTTTACC CTGTTAGGGC TTTCTCTACC GGGTTTAATC
ACTTTCTTAC TCTTCTGGCT GGTGAACGTC GGAATCGGTT TCGGTGATGG CAAAGTTTTA
AATAAATTCA CTGCCATTCT TAACCCGTGC ATCTATATCG TTTTCGGCGG TATGGCGATT
TGGGCGATTT CGCTGGTCGG GATCGGTCCA ATCTTTGACT ATATTCCGGG CGGTATTCAG
AAAGCAGAAA ACGGTGGCTT CCTGTTCCTG GTGGTGATTA ACGCGGTAGT TGCGGTCTGG
GCGGCACCGG CGGTGAGCGC ATCCGACTTT ACGCAAAACG CCCACTCGTT TCGTGAGCAG
GCGCTGGGGC AAACGCTGGG TTTAGTTGTG GCCTATATTC TGTTTGCGGT CGCCGGGGTA
TGTATTATTG CCGGAGCCAG TATTCACTAC GGCGCGGACA CCTGGAACGT GCTGGATATT
GTTCAGCGTT GGGACAGCCT GTTTGCCTCG TTCTTTGCGG TACTGGTTAT TCTGATGACG
ACTATCTCCA CTAACGCCAC CGGTAATATT ATTCCGGCTG GTTATCAGAT AGCCGCTATT
GCACCGACGA AACTGACCTA TAAAAACGGC GTACTGATTG CCAGTATTAT CAGCTTGCTG
ATCTGCCCGT GGAAATTAAT GGAAAATCAG GACAGCATTT ATCTGTTCCT CGATATTATC
GGCGGAATGC TGGGTCCGGT AATTGGTGTC ATGATGGCGC ATTATTTTGT GGTGATGCGC
GGACAAATTA ATCTTGATGA ACTGTATACC GCAGCAGGGG ATTTCAAATA TTACGATAAC
GGCTTTAACC TTACCGCGTT CTCAGTAACT TTGGTCGCCG TTATTTTATC TCTCGGTGGT
AAATTTATTC CGTTCATGGA GCCTTTATCA CGCGTTTCAT GGTTTGTCGG CGTTATTGTC
GCCTTTGCGG CCTACGCCTT ATTAAAGAAG CGTACTGCAG CAGAAAAAAC AGGAGAACAA
AAAGTCACAG GTTAA
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| Protein sequence | MEHQRKLFQQ RGYSEDLLPK TQSQRTWKTF NYFTLWMGSV HNVPNYVMVG GFFILGLSTF
SIMLAIILSA FFIAAVMVLN GAAGSKYGVP FAMILRASYG VRGALFPGLL RGGIAAIMWF
GLQCYAGSLA CLILIGKIWP GFLTLGGDFT LLGLSLPGLI TFLLFWLVNV GIGFGDGKVL
NKFTAILNPC IYIVFGGMAI WAISLVGIGP IFDYIPGGIQ KAENGGFLFL VVINAVVAVW
AAPAVSASDF TQNAHSFREQ ALGQTLGLVV AYILFAVAGV CIIAGASIHY GADTWNVLDI
VQRWDSLFAS FFAVLVILMT TISTNATGNI IPAGYQIAAI APTKLTYKNG VLIASIISLL
ICPWKLMENQ DSIYLFLDII GGMLGPVIGV MMAHYFVVMR GQINLDELYT AAGDFKYYDN
GFNLTAFSVT LVAVILSLGG KFIPFMEPLS RVSWFVGVIV AFAAYALLKK RTAAEKTGEQ
KVTG
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