| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0542 |
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| Symbol | |
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| ID | 6145808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 548699 |
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| End bp | 549469 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615436 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001742643 |
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| Protein GI | 170681540 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT CGGTCTTAAT TACCGGATGT TCCAGTGGAA TTGGCCTGGA AAGCGCGCTC
GAATTAAAAC GCCAGGGTTT TCATGTGCTG GCAGGTTGCC GGAAAGCGGA TGATGTTGAG
CGCATGAACA GCATGGGATT TACCGGCGTG TTGATCGATC TGGATTCACC AGAAAGTGTT
GATCGCGCAG CCGACGAAGT GATCGCCCTG ACCGATAATT GTCTGTATGG GATCTTTAAC
AATGCCGGAT TCGGCATGTA TGGCCCCCTT TCCACCATCA GCCGTGTGCA GATGGAACAG
CAGTTTTCCG CCAACTTTTT CGGCGCACAC CAGCTCACCA TGCGCCTGTT ACCCGTGATG
TTACCGCACG GTGAAGGACG TATTGTGATG ACCTCATCGG TGATGGGATT AATCTCCACG
CCGGGTCGTG GCGCTTACGC GGCCAGTAAA TATGCGCTGG AGGCGTGGTC AGACGCACTG
CGCATGGAGC TACGTCACAG CGGAATTAAA GTTAGCCTGA TCGAACCCGG TCCCATTCGT
ACTCGCTTCA CCGACAACGT CAACCAGACG CAAAGTGATA AACCTGTCGA AAATCCCGGC
ATCGCCGCCC GCTTTACGTT GGGACCGGAA GCGGTGGTCG ACAAAGTGCG CCATGCTTTT
ATTAGCGAGA AGCCGAAGAT GCGCTATCCA GTAACGCTGG TGACCTGGGC AGTAATGGTG
CTTAAGCGCC TGCTGCCGGG GCGCGTGATG GACAAAATAT TGCAGGGGTG A
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| Protein sequence | MQKSVLITGC SSGIGLESAL ELKRQGFHVL AGCRKADDVE RMNSMGFTGV LIDLDSPESV
DRAADEVIAL TDNCLYGIFN NAGFGMYGPL STISRVQMEQ QFSANFFGAH QLTMRLLPVM
LPHGEGRIVM TSSVMGLIST PGRGAYAASK YALEAWSDAL RMELRHSGIK VSLIEPGPIR
TRFTDNVNQT QSDKPVENPG IAARFTLGPE AVVDKVRHAF ISEKPKMRYP VTLVTWAVMV
LKRLLPGRVM DKILQG
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