Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0495 |
Symbol | amt |
ID | 6145333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 501280 |
End bp | 502566 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641615389 |
Product | ammonium transporter |
Protein accession | YP_001742596 |
Protein GI | 170680701 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAG CGACGATAAA AACTGGGCTT GCTTCACTGG CGATGCTGCC GGGACTGGTA ATGGCTGCAC CTGCGGTGGC CGATAAAGCC GACAATGCGT TTATGATGAT TTGTACTGCG CTGGTGCTGT TTATGACTAT TCCGGGGATT GCCCTGTTTT ACGGTGGGTT GATTCGCGGC AAAAACGTGC TGTCGATGCT GACGCAGGTG ACGGTGACGT TTGCACTGGT CTGTATTCTC TGGGTGGTTT ACGGTTACTC GCTGGCGTTT GGTGAGGGAA ACAACTTCTT CGGCAACATT AACTGGTTGA TGCTGAAAAA CATCGAACTG ACGGCGGTGA TGGGCAGCAT TTATCAGTAT ATCCACGTAG CGTTTCAGGG ATCGTTTGCC TGCATTACCG TAGGCTTGAT AGTTGGAGCA CTGGCGGAAC GAATCCGCTT CTCAGCTGTG TTGATTTTCG TGGTGGTATG GCTGACGCTC TCCTACATTC CGATTGCGCA TATGGTCTGG GGCGGCGGTT TGCTGGCTTC TCACGGTGCA CTGGATTTCG CGGGTGGCAC GGTGGTGCAC ATTAACGCCG CAATCGCCGG TCTGGTGGGC GCGTATCTGA TAGGCAAACG CGTGGGCTTC GGCAAAGAGG CGTTTAAACC GCACAACCTG CCGATGGTCT TCACCGGGAC TGCCATTCTC TATATCGGTT GGTTTGGCTT TAACGCCGGG TCAGCGGGCA CGGCGAATGA AATCGCAGCA CTGGCATTTG TGAATACTGT GGTCGCAACG GCGGCAGCAA TTCTTGGCTG GATCTTCGGT GAATGGGCGC TGCGCGGTAA GCCTTCACTG CTGGGAGCGT GTTCTGGCGC GATTGCCGGT CTGGTCGGCG TGACGCCAGC CTGTGGCTAC ATTGGGGTTG GCGGCGCGTT GATTATCGGC GTGGTAGCTG GTCTGGCGGG CTTGTGGGGC GTTACCATGC TCAAACGTTT GCTGCGGGTG GATGATCCCT GCGATGTTTT CGGTGTGCAC GGCGTTTGTG GCATTGTCGG CTGTATCATG ACCGGGATTT TTGCCGCCAG CTCGCTGGGC GGCGTGGGCT TCGCTGAAGG TGTGACGATG GGCCATCAGT TGCTGGTACA GCTGGAAAGC ATCGCCATTA CGATCGTCTG GTCCGGTGTG GTGGCGTTTA TTGGCTACAA ACTGGCGGAT CTGACGGTTG GTCTGCGTGT ACCGGAAGAA CAGGAGCGAG AAGGGCTGGA CGTCAACAGC CACGGCGAGA ATGCCTATAA CGCGTAA
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Protein sequence | MKIATIKTGL ASLAMLPGLV MAAPAVADKA DNAFMMICTA LVLFMTIPGI ALFYGGLIRG KNVLSMLTQV TVTFALVCIL WVVYGYSLAF GEGNNFFGNI NWLMLKNIEL TAVMGSIYQY IHVAFQGSFA CITVGLIVGA LAERIRFSAV LIFVVVWLTL SYIPIAHMVW GGGLLASHGA LDFAGGTVVH INAAIAGLVG AYLIGKRVGF GKEAFKPHNL PMVFTGTAIL YIGWFGFNAG SAGTANEIAA LAFVNTVVAT AAAILGWIFG EWALRGKPSL LGACSGAIAG LVGVTPACGY IGVGGALIIG VVAGLAGLWG VTMLKRLLRV DDPCDVFGVH GVCGIVGCIM TGIFAASSLG GVGFAEGVTM GHQLLVQLES IAITIVWSGV VAFIGYKLAD LTVGLRVPEE QEREGLDVNS HGENAYNA
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