Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0315 |
Symbol | |
ID | 6142970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 320869 |
End bp | 321579 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615211 |
Product | hypothetical protein |
Protein accession | YP_001742419 |
Protein GI | 170684180 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0440166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00820963 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAGGC GACGTGGCGT AACATTAACT AAGGCCCTGC TGACAGTGGT CTGTATGCTG GCGGCACCTT TGACACAGGC GATTTCGGTC GGCAATCTGA CATTTTCGCT GCCGTCCGAG ACTGACTTTG TCAGCAAACG TGTAGTGAAT AACAACAAAA GCGCGCGGAT ATACCGTATT GCCATCAGTG CTATCGATAG CCCGGGCAGC AGTGAATTGC GCACTCGACC GGTGGATGGT GAACTGCTTT TCGCCCCCCG CCAGCTGGCG TTGCAGGCTG GTGAGAGCGA GTATTTTAAA TTTTACTATC ATGGTCCACA GGATAACCGC GAGCGCTACT ACCGGGTCTC ATTTCGCGAG GTCCCCACTC GCAACCAGAC AAGACGTAGC CCAACCGGCG GCGAGGTCAG CACAGAGCCG GTGGTGGTGA TGGATACCAT TCTGGTAGTA CGACCACGTC AGGTTCAGTT TAAATGGTCC TTCGACCAGG TGACAGGAAC GGTAAGTAAC ACCGGCAACA CGTGGTTTAA GCTACTGATT AAACCAGGAT GTGATTCGAC CGAAGAGGAA GGCGATGCCT GGTATCTACG TCCGGGAGAC GTGGTTCATC AGCCTGAGTT ACGTCAGCCG GGGAATCACT ATCTGGTCTA TAACGACAAA TTCATTAAGA TTAGCGATTC CTGTCCGGCT AAGCCCCCTT CGGCGGACTA A
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Protein sequence | MFRRRGVTLT KALLTVVCML AAPLTQAISV GNLTFSLPSE TDFVSKRVVN NNKSARIYRI AISAIDSPGS SELRTRPVDG ELLFAPRQLA LQAGESEYFK FYYHGPQDNR ERYYRVSFRE VPTRNQTRRS PTGGEVSTEP VVVMDTILVV RPRQVQFKWS FDQVTGTVSN TGNTWFKLLI KPGCDSTEEE GDAWYLRPGD VVHQPELRQP GNHYLVYNDK FIKISDSCPA KPPSAD
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