Gene EcSMS35_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0315 
Symbol 
ID6142970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp320869 
End bp321579 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content53% 
IMG OID641615211 
Producthypothetical protein 
Protein accessionYP_001742419 
Protein GI170684180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0440166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00820963 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAGGC GACGTGGCGT AACATTAACT AAGGCCCTGC TGACAGTGGT CTGTATGCTG 
GCGGCACCTT TGACACAGGC GATTTCGGTC GGCAATCTGA CATTTTCGCT GCCGTCCGAG
ACTGACTTTG TCAGCAAACG TGTAGTGAAT AACAACAAAA GCGCGCGGAT ATACCGTATT
GCCATCAGTG CTATCGATAG CCCGGGCAGC AGTGAATTGC GCACTCGACC GGTGGATGGT
GAACTGCTTT TCGCCCCCCG CCAGCTGGCG TTGCAGGCTG GTGAGAGCGA GTATTTTAAA
TTTTACTATC ATGGTCCACA GGATAACCGC GAGCGCTACT ACCGGGTCTC ATTTCGCGAG
GTCCCCACTC GCAACCAGAC AAGACGTAGC CCAACCGGCG GCGAGGTCAG CACAGAGCCG
GTGGTGGTGA TGGATACCAT TCTGGTAGTA CGACCACGTC AGGTTCAGTT TAAATGGTCC
TTCGACCAGG TGACAGGAAC GGTAAGTAAC ACCGGCAACA CGTGGTTTAA GCTACTGATT
AAACCAGGAT GTGATTCGAC CGAAGAGGAA GGCGATGCCT GGTATCTACG TCCGGGAGAC
GTGGTTCATC AGCCTGAGTT ACGTCAGCCG GGGAATCACT ATCTGGTCTA TAACGACAAA
TTCATTAAGA TTAGCGATTC CTGTCCGGCT AAGCCCCCTT CGGCGGACTA A
 
Protein sequence
MFRRRGVTLT KALLTVVCML AAPLTQAISV GNLTFSLPSE TDFVSKRVVN NNKSARIYRI 
AISAIDSPGS SELRTRPVDG ELLFAPRQLA LQAGESEYFK FYYHGPQDNR ERYYRVSFRE
VPTRNQTRRS PTGGEVSTEP VVVMDTILVV RPRQVQFKWS FDQVTGTVSN TGNTWFKLLI
KPGCDSTEEE GDAWYLRPGD VVHQPELRQP GNHYLVYNDK FIKISDSCPA KPPSAD