| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0195 |
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| Symbol | dnaE |
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| ID | 6145063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 214308 |
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| End bp | 217790 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641615096 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001742312 |
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| Protein GI | 170682325 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.220929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC CACGTTTCGT ACACCTGCGG GTGCACAGCG ACTACTCGAT GATCGATGGC
CTGGCCAAAA CCGCACCGCT GGTAAAAAAG GCGGCGGCGT TGGGTATGCC AGCACTGGCG
ATCACCGATT TCACCAACCT TTGCGGTCTG GTGAAGTTCT ACGGAGCGGG ACATGGCGCA
GGGATTAAGC CCATCGTCGG GGCGGATTTT AACGTCCAGT GCGACCTGCT GGGTGATGAG
TTAACCCACC TGACGGTGCT GGCGGCGAAC AATACCGGCT ATCAGAATCT GACGTTGCTG
ATCTCAAAAG CGTATCAGCG CGGGTACGGT GCCGCCGGGC CGATCATCGA TCGCGACTGG
CTTATCGAAT TAAATGAAGG GTTGATCCTT CTTTCCGGCG GGCGCATGGG CGACGTTGGA
CGCAGTCTTT TGCGTGGTAA CAGCGCGCTG GTAGATGAGT GTGTCGCGTT TTATGAAGAA
CACTTCCCGG ATCGCTATTT TCTCGAGCTG ATCCGCACCG GCAGGCCGGA CGAAGAAAGC
TATCTGCACG CTGCGGTGGA ACTGGCGGAA TCACGCGGTT TGCCCGTTGT GGCGACCAAC
GACGTGCGCT TTATCGACAG CAGCGACTTT GACGCACACG AAATCCGCGT CGCGATCCAC
GACGGCTTTA CCCTCGACGA TCCTAAACGC CCGCGTAACT ATTCGCCGCA GCAATATATG
CGTAGCGAAG AGGAGATGTG CGAGCTTTTT GCCGACATTC CCGAAGCCCT TGCCAACACC
GTTGAGATAG CCAAACGTTG TAACGTAACT GTGCGTCTGG GTGAATACTT CTTGCCGCAA
TTCCCGACCG GGGACATGAG CACCGAAGAT TATCTGGTCA AGCGTGCAAA AGAAGGCCTG
GAAGAGCGTC TGGCCTTTTT ATTCCCTGAC GAGGAAGAAC GTCTGAAGCG CCGCCCGGAA
TATGACGAGC GTCTGGAGAC TGAACTTCAG GTTATCAACC AGATGGGCTT CCCGGGTTAC
TTCCTCATCG TTATGGAATT TATCCAGTGG TCGAAAGATA ACGGCGTACC GGTAGGGCCA
GGCCGTGGCT CCGGTGCGGG TTCACTGGTG GCCTACGCGC TGAAAATCAC CGACCTCGAT
CCGCTGGAAT TTGACCTGCT GTTCGAACGT TTCCTTAACC CGGAACGTGT CTCCATGCCT
GACTTCGACG TTGACTTCTG TATGGAGAAA CGCGACCAGG TTATCGAACA TGTGGCGGAC
ATGTACGGTC GCGATGCGGT ATCGCAGATT ATCACCTTCG GTACGATGGC GGCGAAAGCG
GTGATCCGCG ACGTAGGCCG CGTGCTGGGC CATCCGTACG GCTTTGTCGA TCGTATCTCG
AAACTGATCC CGCCCGATCC GGGGATGACG CTGGCGAAAG CGTTTGAAGC CGAGCCGCAG
CTGCCGGAAA TCTACGAAGC GGATGAAGAA GTTAAGGCGC TGATCGACAT GGCGCGCAAA
CTGGAAGGGG TCACCCGTAA CGCCGGTAAG CACGCCGGTG GGGTGGTTAT CGCACCGACC
AAAATTACCG ATTTTGCGCC GCTTTACTGC GATGAAGAGG GCAAACATCC GGTCACCCAG
TTTGATAAAA GCGACGTTGA ATACGCCGGG CTGGTGAAGT TCGACTTCCT CGGTTTGCGT
ACGCTCACCA TCATCAACTG GGCGCTGGAG ATGATCAACA AGCGGCGGGC GAAGAATGGC
GAGCCGCCGC TGGATATCGC CGCGATCCCG CTGGATGACA AGAAAAGCTT CGACATGCTG
CAACGCTCGG AAACCACGGC GGTATTCCAG CTTGAATCGC GCGGCATGAA GGACCTGATC
AAGCGTCTGC AACCTGACTG CTTCGAAGAT ATGATCGCAC TGGTGGCACT GTTCCGCCCT
GGTCCGTTGC AGTCAGGGAT GGTGGATAAC TTTATCGACC GTAAACATGG TCGCGAAGAG
ATCTCCTATC CGGACGTGCA GTGGCAGCAT GAAAGCCTGA AACCGGTACT GGAGCCAACC
TACGGCATCA TCCTGTATCA GGAACAGGTC ATGCAGATTG CCCAGGTGCT TTCTGGTTAT
ACCCTCGGTG GCGCGGATAT GCTGCGTCGT GCGATGGGTA AGAAAAAGCC GGAAGAGATG
GCTAAGCAGC GTTCTGTATT TGCTGAAGGT GCAGAAAAGA ACGGAATTAA CGCCGAACTG
GCGATGAAAA TCTTCGACCT GGTGGAGAAA TTCGCGGGTT ACGGATTTAA CAAATCGCAC
TCTGCGGCCT ATGCTTTGGT GTCATATCAA ACGTTATGGC TGAAAGCGCA CTATCCGGCG
GAGTTTATGG CGGCGGTAAT GACCGCCGAT ATGGACAACA CCGAGAAGGT GGTGGGCCTG
GTGGATGAGT GCTGGCGGAT GGGGCTGAAA ATCCTGCCAC CAGATATAAA CTCCGGTCTT
TACCATTTCC ACGTCAACGA CGACGGCGAA ATCGTGTATG GTATTGGCGC GATCAAAGGG
GTCGGTGAAG GTCCGATTGA GGCCATCATC GAAGCCCGTA ATAAAGGCGG CTACTTCCGC
GAACTGTTTG ATCTCTGCGC CCGAACCGAC ACCAAAAAGT TAAACCGGCG AGTGCTGGAA
AAATTGATCA TGTCCGGGGC GTTTGACCGT CTTGGGCCAC ACCGCGCGGC GTTGATGAAC
TCGCTGGGCG ATGCGTTAAA AGCGGCTGAT CAACACGCAA AAGCGGAAGC CATCGGTCAG
GCCGATATGT TCGGCGTGCT GGCAGAAGAG CCGGAACAAA TTGAACAATC CTACGCCAGC
TGCCAACCGT GGCCGGAGCA GGTGGTATTA GATGGGGAAC GTGAAACGTT AGGTCTGTAC
CTGACGGGAC ACCCTATCAA CCAGTATTTA AAAGAGATTG AGCGTTATGT CGGAGGCATA
AGGCTGAAAG ACATGCACCC GACAGAACGT GGTAAAGTCA TCACGGCTGC GGGGCTCGTT
GTTGCTGCGC GGGTTATGGT CACCAAGCGC GGCAATCGTA TCGGTATCTG CACGCTGGAT
GACCGTTCCG GGCGGCTGGA AGTGATGTTG TTTACTGACG CCCTGGATAA ATACCAGCAA
TTGCTGGAAA AAGACCGCAT ACTTATCGTC AGCGGACAGG TCAGCTTTGA TGACTTCAGC
GGTGGGCTTA AAATGACCGC TCGCGAAGTG ATGGATATTG ACGAAGCCCG GGAAAAATAT
GCTCGCGGGC TTGCTATCTC GCTGACGGAC AGGCAAATTG ATGACCAGCT TTTAAACCGA
CTCCGTCAGT CTCTGGAACC CCACCGCTCT GGGACAATTC CAGTACATCT CTACTATCAG
AGGGCGGATG CACGCGCGCG GTTGCGTTTT GGCGCGACGT GGCGTGTCTC TCCGAGCGAT
CGTTTATTAA ACGATCTCCG TGGCCTCATT GGTTCGGAGC AGGTGGAACT GGAGTTTGAC
TAA
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| Protein sequence | MSEPRFVHLR VHSDYSMIDG LAKTAPLVKK AAALGMPALA ITDFTNLCGL VKFYGAGHGA
GIKPIVGADF NVQCDLLGDE LTHLTVLAAN NTGYQNLTLL ISKAYQRGYG AAGPIIDRDW
LIELNEGLIL LSGGRMGDVG RSLLRGNSAL VDECVAFYEE HFPDRYFLEL IRTGRPDEES
YLHAAVELAE SRGLPVVATN DVRFIDSSDF DAHEIRVAIH DGFTLDDPKR PRNYSPQQYM
RSEEEMCELF ADIPEALANT VEIAKRCNVT VRLGEYFLPQ FPTGDMSTED YLVKRAKEGL
EERLAFLFPD EEERLKRRPE YDERLETELQ VINQMGFPGY FLIVMEFIQW SKDNGVPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMEK RDQVIEHVAD
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPDPGMT LAKAFEAEPQ
LPEIYEADEE VKALIDMARK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DEEGKHPVTQ
FDKSDVEYAG LVKFDFLGLR TLTIINWALE MINKRRAKNG EPPLDIAAIP LDDKKSFDML
QRSETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREE
ISYPDVQWQH ESLKPVLEPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRSVFAEG AEKNGINAEL AMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA
EFMAAVMTAD MDNTEKVVGL VDECWRMGLK ILPPDINSGL YHFHVNDDGE IVYGIGAIKG
VGEGPIEAII EARNKGGYFR ELFDLCARTD TKKLNRRVLE KLIMSGAFDR LGPHRAALMN
SLGDALKAAD QHAKAEAIGQ ADMFGVLAEE PEQIEQSYAS CQPWPEQVVL DGERETLGLY
LTGHPINQYL KEIERYVGGI RLKDMHPTER GKVITAAGLV VAARVMVTKR GNRIGICTLD
DRSGRLEVML FTDALDKYQQ LLEKDRILIV SGQVSFDDFS GGLKMTAREV MDIDEAREKY
ARGLAISLTD RQIDDQLLNR LRQSLEPHRS GTIPVHLYYQ RADARARLRF GATWRVSPSD
RLLNDLRGLI GSEQVELEFD
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