| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0173 |
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| Symbol | degP |
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| ID | 6146103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 191079 |
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| End bp | 192503 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615074 |
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| Product | serine endoprotease |
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| Protein accession | YP_001742290 |
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| Protein GI | 170680398 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCACATTAGC ACTGAGTGCA CTGGCTCTGA GTTTAGGTTT GGCGTTATCT
CCGCTCTCTG CAACGGCGGC TGAGACTTCT TCAGCAACGA CAGCCCAGCA GATGCCAAGC
CTTGCACCGA TGCTCGAAAA GGTGATGCCT TCAGTGGTCA GCATTAACGT AGAAGGTAGC
ACAACCGTTA ATACGCCGCG TATGCCGCGT AATTTCCAGC AGTTCTTCGG TGATGATTCT
CCGTTCTGCC AGGAAGGTTC TCCGTTCCAG AGTTCTCCGT TCTGCCAGGG TGGCCAGGGC
GGTAATGGTG GCGGCCAGCA ACAGAAATTC ATGGCGCTGG GTTCCGGCGT CATCATTGAT
GCCGATAAAG GCTATGTCGT CACCAACAAC CACGTTGTTG ATAACGCGAC GGTGATTAAA
GTCCAACTGA GCGATGGCCG TAAGTTCGAC GCGAAGATGG TTGGCAAAGA TCCGCGCTCT
GATATCGCGC TGATCCAGAT CCAGAACCCG AAAAACCTGA CCGCAATTAA GATGGCGGAT
TCTGATGCAC TGCGCGTGGG TGATTACACC GTAGCGATTG GTAACCCGTT TGGTCTGGGC
GAGACGGTAA CTTCCGGGAT TGTCTCTGCG CTGGGGCGTA GCGGCCTGAA TGCCGAAAAC
TACGAAAACT TCATCCAGAC CGATGCAGCG ATTAACCGTG GTAACTCCGG TGGTGCGCTG
GTTAACCTGA ACGGTGAACT GATCGGTATC AACACCGCGA TCCTCGCACC GGACGGCGGC
AACATCGGTA TCGGTTTTGC TATCCCGAGC AACATGGTGA AAAACCTGAC CTCGCAGATG
GTGGAATACG GCCAGGTGAA ACGCGGTGAG TTGGGTATTA TGGGCACTGA GCTGAACTCC
GATCTGGCGA AAGCGATGAA AGTTGACGCC CAGCGCGGTG CTTTCGTAAG CCAGGTTCTG
CCGAATTCTT CCGCCGCGAA AGCGGGCATT AAAGCGGGTG ATGTGATCAC CTCACTGAAC
GGTAAGCCAA TCAGCAGCTT TGCCGCACTG CGTGCTCAGG TGGGCACTAT GCCGGTAGGT
AGCAAACTGA CCCTGGGCTT ACTGCGCGAC GGGAAGCAGG TTAACGTGAA CCTGGAACTT
CAGCAGAGCA GCCAGAATCA GGTTGATTCC AGCACCATCT TCAACGGCAT TGAAGGCGCT
GAGATGAGTA ACAAAGGCAA AGATCAGGGC GTGGTGGTGA ACAACGTGAA AACGGGCACT
CCGGCTGCGC AGATCGGCCT GAAGAAAGGT GATGTGATTA TTGGCGCGAA CCAGCAGGCA
GTGAAAAACA TCGCTGAACT GCGTAAAGTT CTCGACAGCA AACCGTCTGT GCTGGCACTG
AACATTCAGC GCGGCGACAG CACCATCTAC CTGTTAATGC AGTAA
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| Protein sequence | MKKTTLALSA LALSLGLALS PLSATAAETS SATTAQQMPS LAPMLEKVMP SVVSINVEGS
TTVNTPRMPR NFQQFFGDDS PFCQEGSPFQ SSPFCQGGQG GNGGGQQQKF MALGSGVIID
ADKGYVVTNN HVVDNATVIK VQLSDGRKFD AKMVGKDPRS DIALIQIQNP KNLTAIKMAD
SDALRVGDYT VAIGNPFGLG ETVTSGIVSA LGRSGLNAEN YENFIQTDAA INRGNSGGAL
VNLNGELIGI NTAILAPDGG NIGIGFAIPS NMVKNLTSQM VEYGQVKRGE LGIMGTELNS
DLAKAMKVDA QRGAFVSQVL PNSSAAKAGI KAGDVITSLN GKPISSFAAL RAQVGTMPVG
SKLTLGLLRD GKQVNVNLEL QQSSQNQVDS STIFNGIEGA EMSNKGKDQG VVVNNVKTGT
PAAQIGLKKG DVIIGANQQA VKNIAELRKV LDSKPSVLAL NIQRGDSTIY LLMQ
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