Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0167 |
Symbol | clcA |
ID | 6144534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 185302 |
End bp | 186723 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615068 |
Product | chloride channel protein |
Protein accession | YP_001742284 |
Protein GI | 170682657 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG ATACTCCCTC TTTAGAAACA CCGCAGGCCG CGCGCCTGCG ACGCAGACAA CTGATTCGCC AACTTCTTGA GCGCGATAAA ACCCCGTTAG CCATTTTGTT TATGGCGGCA GTCGTCGGCA CGCTTGTCGG GCTGGCTGCG GTTGCTTTTG ACAAAGGTGT CGCCTGGTTG CAGAACCAAC GTATGGGGGC ACTGGTACAT ACTGCTGATA ATTATCCGCT TCTGTTAACC GTCGCTTTTC TCTGTTCGGC GGTGCTGGCG ATGTTCGGCT ACTTTTTGGT GCGCAAATAC GCGCCGGAAG CAGGTGGTTC GGGGATCCCG GAAATTGAAG GGGCGCTGGA AGATCAACGT CCCGTTCGCT GGTGGCGTGT GTTGCCGGTG AAATTCTTTG GCGGGCTGGG AACACTTGGC GGAGGCATGG TGTTGGGGCG CGAAGGGCCA ACCGTGCAGA TAGGCGGCAA TATCGGGCGG ATGGTACTCG ATGTTTTCCG CCTGAAAGGT GACGAAGCTC GTCATACGCT ACTGGCAACC GGTGCGGCGG CGGGTCTGGC GGCGGCCTTT AACGCCCCGC TAGCGGGTAT TTTGTTTATT ATCGAAGAGA TGCGTCCGCA GTTTCGCTAT ACGTTAATTT CGATTAAAGC GGTATTTATT GGCGTCATTA TGTCGACCAT TATGTACCGG ATTTTTAATC ATGAAGTTGC ATTGATTGAC GTCGGTAAAC TTTCTGACGC GCCGCTTAAT ACGCTGTGGC TTTATCTGAT CCTCGGTATT ATTTTTGGCA TTTTCGGCCC TATTTTTAAT AAATGGGTGC TGGGGATGCA GGATTTGCTG CACCGTGTGC ACGGCGGCAA TATTACCAAA TGGGTACTGA TGGGCGGTGC AATTGGCGGT CTGTGTGGAT TGCTGGGGTT TGTGGCACCA GCAACGTCGG GCGGCGGCTT TAACCTGATT CCTATCGCTA CCGCAGGGAA TTTCAGCATG GGAATGCTGG TGTTTATTTT CGTCGCGCGG GTCATTACCA CCTTACTCTG TTTCTCTTCC GGCGCGCCGG GCGGTATTTT TGCCCCTATG CTGGCGCTGG GTACTGTGCT GGGAACCGCT TTCGGAATGG TTGCCGTTGA GCTGTTTCCG CAATATCACC TTGAAGCAGG CACTTTTGCT ATTGCCGGAA TGGGGGCGTT ACTGGCGGCA TCTATTCGTG CGCCGTTAAC GGGGATTATT CTGGTTCTGG AAATGACCGA TAACTACCAG CTCATTTTGC CAATGATTAT TACCGGTCTT GGCGCAACAC TATTAGCGCA ATTTACCGGC GGGAAACCGC TATACTCGGC GATTCTTGCG CGCACGCTGG CGAAACAGGA AGCTGAGCAA CTGGCGCGAA GCAAGGCCGC ATCAGCCAGC GAGAATACTT GA
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Protein sequence | MKTDTPSLET PQAARLRRRQ LIRQLLERDK TPLAILFMAA VVGTLVGLAA VAFDKGVAWL QNQRMGALVH TADNYPLLLT VAFLCSAVLA MFGYFLVRKY APEAGGSGIP EIEGALEDQR PVRWWRVLPV KFFGGLGTLG GGMVLGREGP TVQIGGNIGR MVLDVFRLKG DEARHTLLAT GAAAGLAAAF NAPLAGILFI IEEMRPQFRY TLISIKAVFI GVIMSTIMYR IFNHEVALID VGKLSDAPLN TLWLYLILGI IFGIFGPIFN KWVLGMQDLL HRVHGGNITK WVLMGGAIGG LCGLLGFVAP ATSGGGFNLI PIATAGNFSM GMLVFIFVAR VITTLLCFSS GAPGGIFAPM LALGTVLGTA FGMVAVELFP QYHLEAGTFA IAGMGALLAA SIRAPLTGII LVLEMTDNYQ LILPMIITGL GATLLAQFTG GKPLYSAILA RTLAKQEAEQ LARSKAASAS ENT
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