Gene EcSMS35_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0117 
Symbol 
ID6144940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp130377 
End bp130661 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content37% 
IMG OID641615018 
Productputative colicin immunity protein 
Protein accessionYP_001742234 
Protein GI170681742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.301889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAG AAAAGCTCCA GGATTATACC GAGGATGAAT TTCTTAATTT TTTAGGCGGA 
TTGAGATCAT CTATGAAAGA TGGGAAATCC TTAAAAGGTA AGGAGCTAGA AATGTACTGG
GATTCATTAG TAGATCATTT TATTGAAATT ACACAGCATC CGTCAGGGAG CGATCTCATT
TTCTACCCTA AAAGTCAAGG AGATGATAAG CCTGAAAACA TCCTGAAAAT TGTCAAAGAA
TGGCGGCGTT CACAGGGGTT ACCCTTGTTT AAAGACTCTA AATAA
 
Protein sequence
MFKEKLQDYT EDEFLNFLGG LRSSMKDGKS LKGKELEMYW DSLVDHFIEI TQHPSGSDLI 
FYPKSQGDDK PENILKIVKE WRRSQGLPLF KDSK