Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0112 |
Symbol | nadC |
ID | 6147011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 124268 |
End bp | 125161 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615013 |
Product | quinolinate phosphoribosyltransferase |
Protein accession | YP_001742229 |
Protein GI | 170681997 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.214233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.539382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCTC GCCGCTATAA CCCTGACACC CGACGTGACG AGCTGCTGGA ACGCATTAAT CTCGATATCC CCGGCGCGGT GGCCCAGGCG CTGCGGGAAG ATTTAGGCGG AACAGTCGAT GCCAACAATG ACATTACGGC AAAACTTTTA CCGGAAAACT CTCGCTCTCA TGCCACAGTG ATCACCCGCG AGAATGGCGT ATTTTGCGGC AAACGCTGGG TTGAAGAGGT GTTTATTCAA CTGGCAGGCG ACGATGTCAC CATAATCTGG CATGTGGATG ACGGCGATGT CATCAACGCC AATCAACCCT TGTTCGAACT TGAAGGCCCA TCTCGCGTGC TGTTAACGGG CGAACGCACT GCGCTTAATT TTGTGCAAAC CCTTTCAGGA GTTGCCAGTA AGGTACGCCA CTATGTCGAA TTACTGGAAG GCACCAACAC GCAGCTGTTG GATACGCGCA AAACCTTACC CGGCCTGCGT TCAGCTCTGA AATACGCGGT ACTTTGCGGC GGCGGAGCGA ATCACCGCCT GGGGCTTTCT GATGCCTTCC TGATCAAAGA AAATCATATT ATTGCCTCCG GCTCAGTGCG CCAGGCGGTC GAAAAAGCGT CCTGGTTGCA CCCGGATGCG CCAGTAGAAG TCGAAGTAGA GAATCTGGAA GAACTTGATG AAGCCCTGAA AGCAGGTGCC GATATCATCA TGCTGGATAA CTTCGAAACA GAACAGATGC GCGAAGCCGT CAAACGCACC AACGGCAAGG CGCTACTGGA AGTGTCTGGC AACGTCACTG ACAAAACACT GCGCGAATTT GCCGAAACGG GCGTGGACTT TATCTCCGTC GGTGCGCTAA CTAAACACGT ACAGGCACTC GACCTATCAA TGCGTTTTTG CTGA
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Protein sequence | MPPRRYNPDT RRDELLERIN LDIPGAVAQA LREDLGGTVD ANNDITAKLL PENSRSHATV ITRENGVFCG KRWVEEVFIQ LAGDDVTIIW HVDDGDVINA NQPLFELEGP SRVLLTGERT ALNFVQTLSG VASKVRHYVE LLEGTNTQLL DTRKTLPGLR SALKYAVLCG GGANHRLGLS DAFLIKENHI IASGSVRQAV EKASWLHPDA PVEVEVENLE ELDEALKAGA DIIMLDNFET EQMREAVKRT NGKALLEVSG NVTDKTLREF AETGVDFISV GALTKHVQAL DLSMRFC
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