Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0102 |
Symbol | secM |
ID | 6145359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 114264 |
End bp | 114851 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615003 |
Product | SecA regulator SecM |
Protein accession | YP_001742219 |
Protein GI | 170682119 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000627465 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.544351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGTGGA CTTCAGGCTT TAATGATAAG ATTTGTGCGC TAAATACGTT TGAATACGAT CGGGATGGCA ATAACGTGAG TGGAATACTG ACGCGCTGGC GACAGTTTGG TAAACGCTAC TTCTGGCCGC ATCTCTTATT AGGGATGGTC GCGGCGAGTT TAGGTTTGCC TGCACTCAGC AATGCCGCCG AACCAAACGC GCCCGCAAAA GCGACAACCC GCAACCACGA GCCTTCAGCC AAAGTTAACT TTGGTCAATT GGCCTTGCTG GAAGCGAACA CGCGCCGCCC GAATTCGAAC TATTCCGTTG ATTACTGGCA TCAACATGCC ATTCGCACGG TAATCCGCCA TCTTTCCTTC GCAATGGCAC CGCAAACGCT GCCCGTTGCT GAAGAATCTT TGCCTCTTCA GGCGCAACAT CTTGCATTAC TGGATACGCT CAGCGCGCTG TTGACCCAGG AAGGCACGCC GTCTGGAAAG GGTTATCGCA TTGATTATGC GCATTTTACC CCGCAAGCAA AATTCAGCAC GCCCGTCTGG ATAAACCAGG CGCAAGGCAT CCGTGCTGGC CCTCAACGCC TCAGCTAA
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Protein sequence | MLWTSGFNDK ICALNTFEYD RDGNNVSGIL TRWRQFGKRY FWPHLLLGMV AASLGLPALS NAAEPNAPAK ATTRNHEPSA KVNFGQLALL EANTRRPNSN YSVDYWHQHA IRTVIRHLSF AMAPQTLPVA EESLPLQAQH LALLDTLSAL LTQEGTPSGK GYRIDYAHFT PQAKFSTPVW INQAQGIRAG PQRLS
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