| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4612 |
|---|
| Symbol | |
|---|
| ID | 5593824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 4615726 |
|---|
| End bp | 4616799 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640923706 |
|---|
| Product | patatin family phospholipase |
|---|
| Protein accession | YP_001461143 |
|---|
| Protein GI | 157163825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGCAGC GAATACCTGT AACGCTTGGT AATATTGCGC CGTTGTCGCT AAGGCCGTTC
CAGCCTGGAC GAATAGCTCT GGTGTGCGAA GGCGGCGGAC AGCGTGGAAT TTTCACGGCT
GGCGTGCTGG ATGAGTTTAT GCGCGCGCAG TTTAATCCTT TCGATCTTTA TCTCGGCACA
TCTGCCGGGG CGCAGAACCT CTCGGCGTAT ATCTGCAATC AGCCCGGTTA CGCGCGCAAA
GTCATCATGC GCTATACCAC AAAACGCGAA TTTTTCGATC CATTGCGCTT TGTCCGTGGA
GGAAATCTTA TTGATCTCGA CTGGCTGGTG GAGGCCACCG CAAGTCAGAT GCCGTTGCAA
ATGGATACCG CCGCGCGGTT GTTTGACAGC GGCAAATCGT TTTATATGTG CGCCTGTCGT
CAGGATGACT ACGCGCCGAA TTACTTTTTA CCAACCAAAC AAAACTGGCT GGATGTGATT
CGCGCCTCCA GTGCGATACC TGGCTTTTAT CGTAGCGGAG TGTCGCTGGA AGGCATTAAC
TACTTGGATG GCGGGATCAG TGATGCGATT CCGGTTAAAG AGGCGGCAAG GCAGGGCGCT
AAAACGTTGG TCGTCATCCG CACTGTGCCG TCACAAATGT ACTACACGCC GCAGTGGTTC
AAACGCATGG AACGCTGGCT GGGTGACAGT AGCCTGCAGC CGCTGGTCAA TCTGGTGCAG
CATCATGAAA CCAGCTATCG TGACATTCAG CAATTTATTG AGAAACCACC GGGCAAGCTG
CGGATATTCG AAATTTATCC ACCGAAGCCA TTACATAGTA TCGCGCTTGG CAGTCGGATT
CCGGCGCTGC GTGAAGACTA TAAACTTGGG CGTTTATGCG GTCGTTATTT CCTCGCCACG
GTTGGCAAGC TATTAACTGA AAAAGCGCCG CTTACCCGCC ATCTGGTGCC AGTGGTGACG
CCGGAATCGA TCGTTATTCC GCCTGCGCCA GTCGCCAACG ATACGCTGGT TGCCGAAGTG
AGCGATGCTC CGCAGGCGAA CGACCCGACA TTTAACAATG AGGATCTGGC TTGA
|
|---|
| Protein sequence | MGQRIPVTLG NIAPLSLRPF QPGRIALVCE GGGQRGIFTA GVLDEFMRAQ FNPFDLYLGT
SAGAQNLSAY ICNQPGYARK VIMRYTTKRE FFDPLRFVRG GNLIDLDWLV EATASQMPLQ
MDTAARLFDS GKSFYMCACR QDDYAPNYFL PTKQNWLDVI RASSAIPGFY RSGVSLEGIN
YLDGGISDAI PVKEAARQGA KTLVVIRTVP SQMYYTPQWF KRMERWLGDS SLQPLVNLVQ
HHETSYRDIQ QFIEKPPGKL RIFEIYPPKP LHSIALGSRI PALREDYKLG RLCGRYFLAT
VGKLLTEKAP LTRHLVPVVT PESIVIPPAP VANDTLVAEV SDAPQANDPT FNNEDLA
|
|---|
| |