Gene EcHS_A4558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4558 
Symbol 
ID5592156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp4565005 
End bp4565688 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content53% 
IMG OID640923654 
Productputative transporter 
Protein accessionYP_001461094 
Protein GI157163776 
COG category[S] Function unknown 
COG ID[COG3314] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC AAGGGGATGC TGTAGCCGGG GAGCTGGCGA CAGAAAAAGT GGGCATTAAA 
GGGTATCTGG CTTTTTTTCT CACCATAATC TTTTTTTCCG GTGTTTTTTC CGGAACAGAC 
AGCTGGTGGC GCGTTTTTGA TTTTTCCGTT CTGAACGGAT CGTTTGGGCA ACTGCCTGGT 
GCGAACGGAG CCACCACCTC ATTTCGCGGG GCGGGTGGCG CGGGGGCTAA AGATGGCTTT 
CTCTTTGCGC TGGAGCTGGC ACCGTCAGTC ATTCTCTCTC TGGGGATTAT TTCAATTACC 
GATGGTCTTG GCGGATTACG CGCCGCGCAG CAGTTAATGA CGCCAGTGCT AAAACCGTTG 
TTGGGCATTC CAGGGATCTG CTCGCTGGCG CTGATCGCTA ACCTGCAAAA CACGGATGCC 
GCCGCCGGTA TGACCAAAGA GCTGGCGCAG GAAGGTGAAA TTACCGAACG CGATAAAGTG 
ATTTTCGCCG CATATCAAAC CAGCGGTAGC GCCATCATCA CCAACTACTT CTCTTCCGGC 
GTCGCGGTGT TTGCCTTTCT GGGCACGTCC GTAATCGTAC CTTTAGCCGT CATCCTGGTG 
TTTAAATTTG TCGGAGCCAA CATTTTGCGC GTCTGGCTTA ACTTCGAAGA ACGTCGCAAC 
CCAACGCAAG GAGCGCAAGC ATGA
 
Protein sequence
MTQQGDAVAG ELATEKVGIK GYLAFFLTII FFSGVFSGTD SWWRVFDFSV LNGSFGQLPG 
ANGATTSFRG AGGAGAKDGF LFALELAPSV ILSLGIISIT DGLGGLRAAQ QLMTPVLKPL 
LGIPGICSLA LIANLQNTDA AAGMTKELAQ EGEITERDKV IFAAYQTSGS AIITNYFSSG 
VAVFAFLGTS VIVPLAVILV FKFVGANILR VWLNFEERRN PTQGAQA