Gene EcHS_A4454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4454 
Symbol 
ID5592353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4459536 
End bp4460327 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content54% 
IMG OID640923552 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001460993 
Protein GI157163675 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000201856 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCA CTCGTCCTGT TGCCGTGATT ACCGGAGCCG CTCGTGGTAT TGGAAAGGGC 
TGTGCGCTGG AGCTTGCTCG TGGCGGGTTT AACCTGCTGA TTAACGATCG TCCCGATGCC
GACAGCGTAG AAAAACTGCA TATCACACAA CAAGAATGTT TGGCAGAAGG CGTGGAAGTC
ATTTGCTTCC CTGCCGATGT CGGCGATCTC TCCTTGCATG AAGAGATGCT CGACGCGGCG
CAAAACCAGT GGGGGCGGCT GGACTGTCTG CTCAATAACG CGGGGATTTC AGTGAAAAAA
CGCGGTGACC TCCTCGACCT CGAACCAGAC AGCTTCGATC AAAACATTGC CATTAACACC
CGCGCGCCGT TCTTCCTTGC TCAGGCATTC AGTAAGCGCT TACTGGCACA GCCGAAACCG
GAAGCGGAGC TGCCGCACCG CTCGATTATT TTCGTCAGTT CCATCAACGC CATCATGCTG
GCGATGAATC GCGGCGAATA CACCATTGCC AAAACCGCCG TTTCTGCCGC TGCTCGTCTG
TTTGCTGCTC GCCTTTGTAA TGAACAAATT GGCGTTTATG AAGTGCGCCC TGGTCTCATC
AAAACCGATA TGACTATTCC GGCAACGGCT TATTACGACG AACTGATTGC CAAAGGTCTG
GTGCCGTGGG GACGTTGGGG TTATCCGGCT GATATTGCTT CCACTGTCCG CGCGATGGCG
GAAGGTAAAC TGATTTACAC CTGTGGTCAG GCGGTCGCCA TCGACGGCGG CTTAAGTATG
CCGCGCTTCT GA
 
Protein sequence
MKSTRPVAVI TGAARGIGKG CALELARGGF NLLINDRPDA DSVEKLHITQ QECLAEGVEV 
ICFPADVGDL SLHEEMLDAA QNQWGRLDCL LNNAGISVKK RGDLLDLEPD SFDQNIAINT
RAPFFLAQAF SKRLLAQPKP EAELPHRSII FVSSINAIML AMNRGEYTIA KTAVSAAARL
FAARLCNEQI GVYEVRPGLI KTDMTIPATA YYDELIAKGL VPWGRWGYPA DIASTVRAMA
EGKLIYTCGQ AVAIDGGLSM PRF