Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4394 |
Symbol | ampC |
ID | 5593543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4403107 |
End bp | 4404240 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640923492 |
Product | beta-lactamase |
Protein accession | YP_001460936 |
Protein GI | 157163618 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAAA CGACGCTCTG CGCCTTATTA ATTACCGCCT CTTGCTCCAC ATTTGCTGCC CCTCAACAAA TCAACGATAT TGTGCATCGC ACAATTACCC CGCTTATAGA GCAACAAAAG ATCCCCGGTA TGGCGGTGGC GGTAATTTAT CAGGGTAAAC CTTATTACTT TACCTGGGGC TATGCGGACA TCGCCAAAAA GCAGCCCGTC ACACAGCAAA CGTTGTTTGA GTTAGGTTCG GTCAGCAAAA CATTTACGGG CGTGCTTGGT GGCGAGGCTA TTGCTCGAGG GGAAATCAAG TTAAGCGATC CCACAACAAA ATACTGGCCT GAACTTACCG CTAAACAGTG GAATGGGATC ACACTATTAC ATCTCGCAAC CTACACTGCT GGCGGCCTGC CATTGCAGGT GCCGGATGAG GTGAAATCCT CAAGCGACTT GCTGCGCTTC TATCAAAACT GGCAGCCTGC ATGGGCGCCA GGAACACAAC GTCTGTATGC CAACTCCAGT ATCGGTTTGT TCGGCGCACT GGCTGTGAAG CCGTCTGGTT TGAGTTTTGA GCAGGCGATG CAAACACGTG TCTTCCAGCC ACTCAAACTC AACCATACGT GGATTAATGT ACCGCCCGCA GAAGAAAAGA ATTACGCCTG GGGATATCGC GAAGGCAAGG CAGTTCATGT TTCGCCAGGG GCGTTAGATG CTGAAACTTA TGGTGTGAAG TCGACCATTG AAGATATGGC CTGCTGGGTA CGAAGCAATA TGAATCCCCG TGATATCAAC GACAAAACAC TTCAGCAAGG GATACAACTG GCACAATCTC GCTACTGGCA AACCGGCGAT ATGTATCAGG GCCTGGGCTG GGAAATGCTG GACTGGCCGG TAAATCCTGA CAGCATCATT AACGGCAGTG GCAATAAAAT TGCACTGGCA GCACACCCCG TAAAAGCGAT TACGCCCCCA ACTCCTGCAG TACGCGCATC ATGGGTACAT AAAACAGGGG CAACCGGCGG ATTTGGTAGC TATGTCGCGT TTATTCCAGA AAAAGAGCTG GGTATAGTGA TGCTGGCTAA CAAAAACTAT CCCAATCCAG CGAGAGTCGC CGCCGCCTGG CAGATTCTCA ACGCTCTACA GTAA
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Protein sequence | MFKTTLCALL ITASCSTFAA PQQINDIVHR TITPLIEQQK IPGMAVAVIY QGKPYYFTWG YADIAKKQPV TQQTLFELGS VSKTFTGVLG GEAIARGEIK LSDPTTKYWP ELTAKQWNGI TLLHLATYTA GGLPLQVPDE VKSSSDLLRF YQNWQPAWAP GTQRLYANSS IGLFGALAVK PSGLSFEQAM QTRVFQPLKL NHTWINVPPA EEKNYAWGYR EGKAVHVSPG ALDAETYGVK STIEDMACWV RSNMNPRDIN DKTLQQGIQL AQSRYWQTGD MYQGLGWEML DWPVNPDSII NGSGNKIALA AHPVKAITPP TPAVRASWVH KTGATGGFGS YVAFIPEKEL GIVMLANKNY PNPARVAAAW QILNALQ
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