| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4188 |
|---|
| Symbol | |
|---|
| ID | 5591200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4177378 |
|---|
| End bp | 4178229 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640923290 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001460749 |
|---|
| Protein GI | 157163431 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCACG ACGTCAGCTA TCTGCTCTCC CGCCTGATCA ACGGCCCGCT GTCCCTGCGC
CAGATTTACT TTGCCAGCAG TAACGGCCCG GTGCCCGATC TTGCGTATCA GGTCGATTTT
CCACGGCTGG AAATTGTGCT GGAAGGTGAG TTTGTTGATA CCGGCGCTGG AGCAACGTTA
GTTCCCGGCG ATGTGCTGTA CGTTGCCGCT GGTGGCTGGA ATTTCCCACA ATGGAAAACA
CCCGCTACCA CCTTTAGCGT GCTGTTTGGC AAACAGCAAC TCGGCTTCAG CGTCGTGCAA
TGGGATGGCA AACAATATCA AAATCTGGCG AAGCAACACG TCGCCCGGCG CGGCCCACGC
ATAGGTTCTT TTCTGCTACA AACGCTCAAT GAAATGCAAA TGCAGCCGCA GGAGCAGCAA
ACGGCAAGGC TTATCGTCGC CAGCCTGCTT AGCCACTGCC GCGATTTGCT TGGCAGCCAA
ATCCAGACCG CCTCACGCAG CCAGGCACTA TTTGAAGCTA TTCGCGATTA TATCGACGAA
CGCTATGCCT CCGCGCTTAC CCGCGAATCT GTTGCGCAGG CGTTTTATAT TTCGCCAAAT
TACCTCTCGC ACCTGTTTCA AAAAACGGGG GCCATTGGTT TTAACGAATA CCTGAATCAC
ACGCGACTGG AGCACGCTAA GACGTTATTG AAAGGCTATG ACCTGAAGGT AAAAGAAGTG
GCGCACGCCT GCGGCTTTGT CGACAGCAAC TACTTCTGCC GTCTGTTTCG TAAAAACACA
GAACGCTCGC CGTCGGAATA TCGTCGGCAG TACCACAGCC AACTGACAGA AAAACCGACT
ACTCCAGAAT AA
|
|---|
| Protein sequence | MYHDVSYLLS RLINGPLSLR QIYFASSNGP VPDLAYQVDF PRLEIVLEGE FVDTGAGATL
VPGDVLYVAA GGWNFPQWKT PATTFSVLFG KQQLGFSVVQ WDGKQYQNLA KQHVARRGPR
IGSFLLQTLN EMQMQPQEQQ TARLIVASLL SHCRDLLGSQ IQTASRSQAL FEAIRDYIDE
RYASALTRES VAQAFYISPN YLSHLFQKTG AIGFNEYLNH TRLEHAKTLL KGYDLKVKEV
AHACGFVDSN YFCRLFRKNT ERSPSEYRRQ YHSQLTEKPT TPE
|
|---|
| |