| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3932 |
|---|
| Symbol | |
|---|
| ID | 5592144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3925851 |
|---|
| End bp | 3926573 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640923040 |
|---|
| Product | putative 6-phosphogluconolactonase |
|---|
| Protein accession | YP_001460517 |
|---|
| Protein GI | 157163199 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.548277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA TCATTACCGA AGATTACCAG GAAATGAGCC GTGTCGCGGC ACACCATCTG
CTTGGTTATA TGTCGAAGAC GCGTCGTGTT AACCTGGCAA TTACCGCCGG TAGCACGCCC
AAAGGCATGT ATGAATACCT CACCACCCTG GTTAAAGGTA AGCCCTGGTA CGATAACTGC
TATTTCTATA ATTTCGATGA AATTCCCTTT CGCGGCAAAG AGGGAGAAGG TGTAACGATT
ACCAATCTGC GTAATCTGTT TTTCACCCCT GCGGGGATCA AAGAAGAGAA TATCCAGAAG
CTCACTATTG ATAACTACCG CGAGCATGAT CAGAAACTGG CGCGTGAAGG CGGCCTGGAT
TTGGTGGTGC TGGGATTAGG TGCAGATGGT CATTTTTGTG GCAATTTGCC GAATACGACC
CATTTCCATG AGCAAACCGT GGAGTTCCCG ATCCAGGGAG AGATGGTTGA TATTGTGGCG
CATGGTGAGT TGGGCGGCGA CTTTTCGTTA GTGCCTGACA GCTACGTGAC GATGGGGCCG
AAAAGCATCA TGGCGGCGAA AAACTTGCTG ATAATTGTCA GTGGCGCAGG TAAAGCGCAG
GCACTGAAAA ATGTTCTGCA AGGTCCGGTT ACCGAAGATG TTCCAGCTTC CGTGTTGCAG
CTGCATCCTT CGCTGATGGT AATCGCTGAT AAAGCCGCTG CCGCAGAATT AGCGCTCGGT
TAA
|
|---|
| Protein sequence | MKLIITEDYQ EMSRVAAHHL LGYMSKTRRV NLAITAGSTP KGMYEYLTTL VKGKPWYDNC
YFYNFDEIPF RGKEGEGVTI TNLRNLFFTP AGIKEENIQK LTIDNYREHD QKLAREGGLD
LVVLGLGADG HFCGNLPNTT HFHEQTVEFP IQGEMVDIVA HGELGGDFSL VPDSYVTMGP
KSIMAAKNLL IIVSGAGKAQ ALKNVLQGPV TEDVPASVLQ LHPSLMVIAD KAAAAELALG
|
|---|
| |