| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3903 |
|---|
| Symbol | |
|---|
| ID | 5591956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3897609 |
|---|
| End bp | 3898946 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640923011 |
|---|
| Product | d-galactonate transporter |
|---|
| Protein accession | YP_001460488 |
|---|
| Protein GI | 157163170 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein
[TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGCG GCTTCGCTAT GCCCAAAATC TGGAGAAAGC TCGCTATGGA TATTCCCGTT
AATGCAGCAA AGCCGGGGCG TCGGCGTTAT CTGACGCTGG TGATGATCTT TATTACGGTG
GTCATTTGTT ATGTTGACCG CGCTAACCTG GCCGTGGCTT CCGCCCATAT TCAGGAAGAG
TTCGGTATTA CCAAAGCGGA AATGGGCTAT GTATTTTCGG CCTTCGCCTG GCTTTATACG
CTATGTCAGA TCCCCGGCGG TTGGTTTTTA GATCGCGTAG GTTCTCGCGT GACTTATTTT
ATTGCGATAT TTGGCTGGTC AGTGGCGACT TTATTCCAGG GCTTTGCCAC GGGATTAATG
TCATTAATTG GTCTGCGCGC GATAACCGGT ATTTTCGAAG CGCCCGCTTT CCCGACCAAT
AACCGGATGG TGACCAGCTG GTTCCCGGAA CATGAACGCG CTTCTGCCGT TGGTTTTTAT
ACGTCTGGTC AGTTTGTCGG TCTGGCGTTT CTGACTCCGC TGCTGATCTG GATTCAGGAG
ATGTTGAGCT GGCACTGGGT GTTCATTGTC ACCGGTGGTA TCGGCATTAT CTGGTCGCTG
ATTTGGTTTA AGGTTTATCA GCCGCCGCGC CTGACCAAAG GTATCAGCAA AGCTGAACTG
GATTACATTC GTGATGGCGG CGGTCTGGTG GATGGCGATG CGCCGGTGAA AAAAGAGGCA
CGTCAGCCGT TAACAGCCAA AGACTGGAAA CTGGTGTTTC ATCGTAAACT GATCGGCGTC
TATCTTGGGC AATTTGCGGT GGCTTCTACA CTGTGGTTTT TCTTAACCTG GTTCCCGAAC
TATTTAACCC AGGAAAAAGG AATCACGGCG CTGAAAGCAG GCTTTATGAC CACGGTGCCA
TTCCTCGCGG CGTTTGTCGG CGTCCTGCTC TCTGGCTGGG TCGCGGATCT GCTGGTACGT
AAGGGCTTTT CACTGGGCTT TGCGCGTAAA ACGCCGATTA TCTGCGGCTT GCTGATCTCC
ACCTGCATTA TGGGCGCTAA CTACACTAAC GATCCGATGA TGATTATGTG CCTGATGGCG
CTGGCATTCT TCGGCAACGG TTTTGCTTCG ATTACCTGGT CGCTGGTCTC TTCTCTGGCA
CCGATGCGCC TGATTGGTTT AACCGGCGGC GTGTTTAACT TCGCCGGTGG TCTGGGCGGC
ATCACCGTTC CGCTGGTGGT GGGGTACCTG GCGCAGGGTT ACGGTTTCGC ACCTGCACTG
GTTTATATCT CCGCCGTCGC GTTGATTGGC GCGCTCTCTT ACATCCTGCT GGTGGGCGAT
GTGAAGCGCG TTGGATAA
|
|---|
| Protein sequence | MVSGFAMPKI WRKLAMDIPV NAAKPGRRRY LTLVMIFITV VICYVDRANL AVASAHIQEE
FGITKAEMGY VFSAFAWLYT LCQIPGGWFL DRVGSRVTYF IAIFGWSVAT LFQGFATGLM
SLIGLRAITG IFEAPAFPTN NRMVTSWFPE HERASAVGFY TSGQFVGLAF LTPLLIWIQE
MLSWHWVFIV TGGIGIIWSL IWFKVYQPPR LTKGISKAEL DYIRDGGGLV DGDAPVKKEA
RQPLTAKDWK LVFHRKLIGV YLGQFAVAST LWFFLTWFPN YLTQEKGITA LKAGFMTTVP
FLAAFVGVLL SGWVADLLVR KGFSLGFARK TPIICGLLIS TCIMGANYTN DPMMIMCLMA
LAFFGNGFAS ITWSLVSSLA PMRLIGLTGG VFNFAGGLGG ITVPLVVGYL AQGYGFAPAL
VYISAVALIG ALSYILLVGD VKRVG
|
|---|
| |