Gene EcHS_A3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3589 
Symbol 
ID5594876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3565790 
End bp3566329 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content55% 
IMG OID640922706 
ProductPilN family protein 
Protein accessionYP_001460187 
Protein GI157162869 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00572766 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGC CAATTAATTT TTTGCCCTGG CGACAGCAAC GCCGGACCGC TTTTCTGCGT 
TTCTGGTTGC TGATGTTCGT TGCGCCTCTG CTGCTGGCCG TCGGGATAAC GCTAATACTG
CGTCTGACAG GCAGCGCCGA AGCGCGCATA GACGCCGTTT TGCTTCAGGG GGAACAACAA
CTCGCCCACA GCTTACAGAT AACGAAACCA CGTTTGCTGG AGCAACAGCA GTTACGCGAA
CAGCGTTTGC AACGGCAGCG CCAGCGACAA TTTACCCGCG ACTGGCAATC TGCGCTGGAA
GCTCTGGCGG CGCTTTTACC CGAGCACGCC TGGCTGACAA CGATAAGCTG GCAGCAGGGA
ACGCTGGAGA TCAAGGGGCT TACAACAAGC ATTACCGCGT TAAACGCACT GGAAACGTCA
CTCCGCCAGG ATGCTTCTTT TCATCTCAAT CAGCGGGGGG CCACGCAGCA GGATGCGCAG
GGACGCTGGC AATTTGAGTA TCAGTTAACA AGGAAGGTTA GCGATGAACA TGTTCTTTGA
 
Protein sequence
MNPPINFLPW RQQRRTAFLR FWLLMFVAPL LLAVGITLIL RLTGSAEARI DAVLLQGEQQ 
LAHSLQITKP RLLEQQQLRE QRLQRQRQRQ FTRDWQSALE ALAALLPEHA WLTTISWQQG
TLEIKGLTTS ITALNALETS LRQDASFHLN QRGATQQDAQ GRWQFEYQLT RKVSDEHVL