Gene EcHS_A3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3353 
Symbolmtr 
ID5592807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3355499 
End bp3356743 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content53% 
IMG OID640922471 
Producttryptophan permease 
Protein accessionYP_001459964 
Protein GI157162646 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAC TAACCACCAC CCAAACGTCA CCGTCGCTGC TTGGCGGCGT GGTGATTATC 
GGCGGCACCA TTATTGGCGC AGGGATGTTT TCTCTGCCAG TGGTCATGTC CGGGGCGTGG
TTTTTCTGGT CAATGGCGGC GCTGATCTTT ACCTGGTTCT GTATGCTGCA TTCCGGCTTG
ATGATTCTGG AAGCTAACCT GAATTACCGA ATCGGTTCGA GTTTTGACAC CATCACCAAA
GATTTGCTGG GCAAAGGCTG GAATGTGGTC AACGGTATTT CCATTGCCTT TGTGCTCTAT
ATCCTGACCT ATGCCTATAT TTCTGCCAGT GGTTCAATTC TGCATCACAC CTTCGCAGAG
ATGTCGCTAA ACGTCCCGGC ACGGGCGGCG GGTTTTGGTT TTGCACTGCT GGTAGCGTTT
GTGGTGTGGT TGAGTACTAA GGCCGTCAGC CGCATGACGG CGATTGTGCT GGGGGCGAAA
GTCATTACCT TCTTCCTCAC CTTTGGCAGC CTGTTGGGGC ATGTGCAGCC TGCGACATTG
TTCAACGTTG CAGAAAGCAA TGCATCTTAT GCGCCGTATC TGCTGATGAC ATTGCCGTTC
TGCCTGGCGT CGTTTGGTTA TCACGGTAAC GTGCCAAGCC TGATGAAGTA TTACGGCAAA
GATCCGAAAA CCATCGTGAA ATGCCTGGTG TACGGTACGC TGATGGCACT GGCGCTGTAT
ACCATCTGGT TGCTGGCGAC GATGGGCAAC ATTCCTCGTC CGGAGTTTAT TGGCATCGCC
GAGAAGGGCG GTAACATTGA TGTGCTGGTA CAGGCATTAA GTGGCGTGCT GAACAGCCGT
AGCCTGGACC TTCTGCTGGT CGTGTTCTCA AACTTTGCGG TAGCGAGTTC GTTCCTTGGC
GTAACGCTGG GTTTGTTTGA CTATCTGGCA GATCTGTTTG GTTTCGATGA CTCAGCTGTG
GGCCGCTTGA AAACGGCATT GCTGACCTTT GCCCCGCCAG TTGTGGGGGG GCTGCTGTTC
CCGAACGGAT TCCTGTACGC CATTGGTTAT GCTGGTTTAG CGGCTACCAT CTGGGCGGCA
ATTGTTCCGG CGCTGTTAGC CCGTGCATCG CGTAAACGCT TTGGCAGCCC GAAATTCCGT
GTCTGGGGCG GCAAGCCGAT GATTACGCTG ATTCTGGTGT TTGGCGTTGG CAACGCACTG
GTCCATATCT TATCGAGCTT TAATTTGCTG CCGGTGTATC AGTAA
 
Protein sequence
MATLTTTQTS PSLLGGVVII GGTIIGAGMF SLPVVMSGAW FFWSMAALIF TWFCMLHSGL 
MILEANLNYR IGSSFDTITK DLLGKGWNVV NGISIAFVLY ILTYAYISAS GSILHHTFAE
MSLNVPARAA GFGFALLVAF VVWLSTKAVS RMTAIVLGAK VITFFLTFGS LLGHVQPATL
FNVAESNASY APYLLMTLPF CLASFGYHGN VPSLMKYYGK DPKTIVKCLV YGTLMALALY
TIWLLATMGN IPRPEFIGIA EKGGNIDVLV QALSGVLNSR SLDLLLVVFS NFAVASSFLG
VTLGLFDYLA DLFGFDDSAV GRLKTALLTF APPVVGGLLF PNGFLYAIGY AGLAATIWAA
IVPALLARAS RKRFGSPKFR VWGGKPMITL ILVFGVGNAL VHILSSFNLL PVYQ