| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3222 |
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| Symbol | |
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| ID | 5592065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3230856 |
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| End bp | 3233357 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640922340 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001459838 |
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| Protein GI | 157162520 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.000448746 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAA AATTAAAATT AACCACAATA AGCGAATTGA TTAAAAATAT TTATTGTTCA
TTATCCGTTA TCATCATTGG TTGTGCGTCA GCTTATGCCG TTGAATTCAA CAAAGATTTA
ATCGAAGCCG AAGATCGTGA AAACGTTAAC CTTTCCCAAT TTGAAACTGA TGGCCAATTA
CCCGTCGGCA AATATTCACT AAGCACTCTG ATTAATAATA AGAGGACGCC AATCCATCTG
GACCTGCAAT GGGTATTAAT TGATAACCAA ACTGCAGTTT GTCTGACTCC AGAGCAATTA
ACATTATTAG GCTTTACTGA TGAGATTATT GAAGAGGCTC AGCAAAACCT GATCGATGGT
TGTTACCCTA TCGAAAAAGA AAAACAAATT ACAACTTATC TCGATAAAGG GAAAATGCAA
TTATCCATAT CTGCACCTCA GGCATGGTTA AAATACAAAG ATGCAAACTG GACGCCTCCT
GAACTTTGGG ATCATGGTAT TGCTGGGGCA TTTCTTGACT ACAATTTATA TGCCTCTCAT
TATGCACCAC ATCAGGGCGA TAATTCACAA AATATAAGTT CCTATGGGCA GGCTGGGGTT
AATCTTGGGG CCTGGCGCCT GCGTACTGAT TACCAGTACG ATCAGTCATT TAACAATGGC
AAAAGCCAGG CGAACAACCT GGATTTTCCG CGTATTTATT TGTTTCGCCC AATCCCAGAA
ATTAATGCAA AACTAACTAT AGGTCAATAC GATACCGAAT CGTCTATTTT CGACTCTTTC
CATTTTTCTG GCATTTCGTT GAAAAGTGAT GAAAACATGT TACCGCCAGA TCTACGTGGT
TACGCACCGC AAATCACGGG GGTCGCACAA ACGAATGCAA AGGTCACTGT CTCACAGAAC
AACCGTATTA TTTATCAAGA AAACGTTCCT CCAGGCCCAT TTTCTATTAC CAATTTATTC
AATACATTAC AGGGGCAACT GGACGTCAAG GTTGAAGAAG AGGACGGGCG CGTCACGCAA
TGGCAAGTTG CATCTAATAG CATTCCTTAT CTGACGCGTA AAGGGCAGAT TCGCTACACT
ACTGCAATGG GGAAACCGAC CAGCGTTGGC GGCGATTCCT TACAACAGCC CTTCTTCTGG
ACCGGTGAAT TCTCATGGGG TTGGCTGAAC AACGTATCCC TGTATGGTGG TTCAGTATTA
ACAAACCGTG ATTATCAATC CCTGGCTACC GGAGTTGGTT TTAACCTTAA CTCGTTGGGC
TCATTATCCT TTGATGTCAC GCGATCTGAT GCTCAGTTAC ATAATCAGAA TAAAGAAACG
GGTTATAGCT ACCGTGCTAA CTATTCAAAA CGTTTTGAAT CTACCGGTAG CCAGCTCACT
TTCGCTGGCT ACCGTTTCTC TGATAAAAAC TTTGTGTCGA TGAATGAATA TATCAATGAC
ACTAACCATT ACACGAATTA TCAGAATGAA AAAGAGAGTT ATATTGTCAC GTTTAACCAG
TATCTTGAAT CATTGAGATT AAATACATAC GTAAGTCTGG CTCGTAATAC TTACTGGGAC
GCCAGCAGTA ATGTGAATTA TTCATTATCA CTTAGCCGCG ATTTTGATAT CGGCCCATTA
AAAAACGTAT CCACCTCACT AACATTTAGC CGAATAAACT GGGAAGATGA CAACCAGGAT
CAACTGTACC TAAATATTTC AATTCCCTGG GGAACCAGTA GAACATTGAG CTATGGTATG
CAACGAAATC AGGATAACAA CATTTCGCAT ACTGCTTCGT GGTATGACTC TTCCGATCGA
AATAATTCCT GGAGCGTTTC TGCTTCAGGC GACAATGACG AATTTAAAGA TATGGAGGCG
TCACTGCGCG CCAGTTATCA GCATAATACC GAGAACGGTC GTCTCTATCT CTCCGGTACA
TCACAGCGGG ACAGCTACTA TTCTCTGAAT GCCAGTTGGA ACGGTTCATT CACTGCAACT
CGCCACGGCG CCGCTTTCCA TGACTATAGT GGTAGTGCTG ACTCGCGTTT TATGATCGAC
GCAGACGGCG CTGAAGATAT TCAGTTGAAT AATAAACGCG CGGTAACTAA TCGTTATGGC
ATCGGAGTTA TTCCATCAGT CAGCAGTTAC ATAACAACAT CATTAAGCGT TGACACCCGA
AATCTGCCAG AAAATGTGGA TATCGAAAAC TCGGTTATCA CCACCACCTT AACCGAGGGT
GCTATTGGCT ACGCCAAACT TGATACCCGC AAAGGCTACC AAATCATGGG GATTATTCGC
CTGGCAGATG GTAGTCACCC ACCACTGGGG ATTAGCGTAA AAGATGAAAC CAGCCACAAA
GAATTAGGAC TTGTTGCTGA TGGCGGCTTT GTATACCTCA ACGGCATTCA AGATGACAGC
AAAATTACTT TACACTGGGG TGACAAATCT TGTTTTATTC AACCCCCCCC CAATAGCAGC
AACTTAACCA CCGGAACGGT TATTTTACCG TGTATTAGCT AA
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| Protein sequence | MYKKLKLTTI SELIKNIYCS LSVIIIGCAS AYAVEFNKDL IEAEDRENVN LSQFETDGQL
PVGKYSLSTL INNKRTPIHL DLQWVLIDNQ TAVCLTPEQL TLLGFTDEII EEAQQNLIDG
CYPIEKEKQI TTYLDKGKMQ LSISAPQAWL KYKDANWTPP ELWDHGIAGA FLDYNLYASH
YAPHQGDNSQ NISSYGQAGV NLGAWRLRTD YQYDQSFNNG KSQANNLDFP RIYLFRPIPE
INAKLTIGQY DTESSIFDSF HFSGISLKSD ENMLPPDLRG YAPQITGVAQ TNAKVTVSQN
NRIIYQENVP PGPFSITNLF NTLQGQLDVK VEEEDGRVTQ WQVASNSIPY LTRKGQIRYT
TAMGKPTSVG GDSLQQPFFW TGEFSWGWLN NVSLYGGSVL TNRDYQSLAT GVGFNLNSLG
SLSFDVTRSD AQLHNQNKET GYSYRANYSK RFESTGSQLT FAGYRFSDKN FVSMNEYIND
TNHYTNYQNE KESYIVTFNQ YLESLRLNTY VSLARNTYWD ASSNVNYSLS LSRDFDIGPL
KNVSTSLTFS RINWEDDNQD QLYLNISIPW GTSRTLSYGM QRNQDNNISH TASWYDSSDR
NNSWSVSASG DNDEFKDMEA SLRASYQHNT ENGRLYLSGT SQRDSYYSLN ASWNGSFTAT
RHGAAFHDYS GSADSRFMID ADGAEDIQLN NKRAVTNRYG IGVIPSVSSY ITTSLSVDTR
NLPENVDIEN SVITTTLTEG AIGYAKLDTR KGYQIMGIIR LADGSHPPLG ISVKDETSHK
ELGLVADGGF VYLNGIQDDS KITLHWGDKS CFIQPPPNSS NLTTGTVILP CIS
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