Gene EcHS_A3127 details

Gene Information

• Locus tag: EcHS_A3127
• ID: 5593853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 3138472
• End bp: 3139179
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640922246
• Product: hypothetical protein
• Protein accession: YP_001459746
• Protein GI: 157162428
• COG category: [R] General function prediction only
• COG ID: [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump

Plasmid Coverage information

• Num covering plasmid clones: 74
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCATCG GCCCTTTTAT CAACGCTAGT GCAGTATTAC TGGGTGGCGT TCTCGGCGCA 
CTGCTCAGCC AACGCTTACC GGAACGTATC CGCGTCTCCA TGACATCTAT TTTTGGTCTG 
GCATCGCTGG GGATTGGTAT TTTACTGGTG GTGAAATGTG CCAACCTTCC AGCGATGGTT 
TTAGCTACGC TACTTGGCGC TCTAATTGGC GAAATTTGTT TGCTGGAGAA AGGTGTCAAT 
ACAGCAGTCG CCAAAGCACA AAATCTGTTT CGTCACTCAC GTAAGAAGCC AGCGCATGAA 
TCTTTTATTC AGAATTATGT CGCGATTATT GTCCTGTTTT GCGCCAGCGG CACCGGGATC 
TTCGGGGCGA TGAACGAAGG GATGACCGGC GATCCGAGTA TTTTAATCGC CAAGTCATTT 
CTTGATTTCT TTACGGCGAT GATCTTCGCC TGCTCGCTCG GTATTGCGGT ATCGGTGATT 
AGTATCCCAT TACTGATCAT CCAGTTAACG CTGGCGTGGG CTGCCGCGCT GATATTACCG 
CTGACCACAC CGGCGATGAT GGCAGACTTC AGCGCCGTAG GCGGTTTATT GCTGCTGGCA 
ACCGGATTAC GCATCTGTGG CATTAAAATG TTCCCGGTGG TCAACATGCT TCCAGCACTC 
CTTCTGGCAA TGCCGCTTTC CGCCGCCTGG ACCGCCTGGT TTGCCTGA 

 

Protein sequence

MVIGPFINAS AVLLGGVLGA LLSQRLPERI RVSMTSIFGL ASLGIGILLV VKCANLPAMV 
LATLLGALIG EICLLEKGVN TAVAKAQNLF RHSRKKPAHE SFIQNYVAII VLFCASGTGI 
FGAMNEGMTG DPSILIAKSF LDFFTAMIFA CSLGIAVSVI SIPLLIIQLT LAWAAALILP 
LTTPAMMADF SAVGGLLLLA TGLRICGIKM FPVVNMLPAL LLAMPLSAAW TAWFA