| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3110 |
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| Symbol | |
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| ID | 5593907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3123018 |
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| End bp | 3123998 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640922229 |
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| Product | twitching motility family protein |
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| Protein accession | YP_001459729 |
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| Protein GI | 157162411 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGG AAGAAATTGT GGCCCTTAGT GTAAAGCATA ACGTCTCGGA TCTACACCTG
TGCAGCGCCT GGCCCGCACG ATGGCGCATT CGCGGGCTAA TGGAAGCTGC GCCGTTTGAT
GCGCCGGACG TCGAAGAGCT ACTGCGGGAG TGGCTGGATG ACGATCAGCG GGCAATATTG
CTGGAAAATG GCCAGCTGGA TTTTGCCGTG TCGCTGGCGG AAAACCAGCG GTTGCGTGGC
AGTGCGTTCG CGCAACGGCA AGGTATTTCT CTGGCATTAC GGTTGTTACC TTCGCACTGT
CCACAGCTCG AACAGCTTGG TGCGCCACCG GTATTGCCGG AATTACTCAA GAGCGAGAAT
GGCATGATTC TGGTGACGGG GGCGACGGGG AGTGGCAAAT CTACCACGCT GGCGGCGATG
GTTGGCTATC TTAATCAACA TGCCGATGCG CATATTCTGA CGCTGGAAGA TCCTGTGGAA
TATCTCTATG CCAGCCAGCG ATGTTTGATC CAGCAGCGGG AAATTGGTTT GCACTGTATG
ACGTTCGCAT CGGGGTTGCG GGCCGCATTG CGGGAAGATC CTGATGTGAT TTTGCTCGGA
GAGCTACGTG ACAGTGAGAC AATCCGTCTG GCGCTGACGG CGGCAGAAAC CGGGCATCTG
GTGCTGGCAA CCTTACATAC ACGTGGTGCC GCGCAGGCAG TTGAGCGACT GGTGGATTCA
TTTCCGGCGC AGGAAAAAGA CCCCGTGCGT AATCAACTGG CAGGTAGTTT ACGGGCAGTG
CTGTCACAAA AGCTGGAAGT GGATAAACAG GAAGGACGCG TGGCGCTATT TGAATTGCTG
ATTAACACAC CCGCGGTGGG GAATTTGATT CGTGAAGGGA AAACCCACCA GTTACCGCAT
GTTATTCAAA CCGGGCAGCA GGTGGGGATG ATAACGTTTC AGCAGAGTTA TCAGCACCGG
GTGGGGGAAG GGCGTTTGTG A
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| Protein sequence | MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGLMEAAPFD APDVEELLRE WLDDDQRAIL
LENGQLDFAV SLAENQRLRG SAFAQRQGIS LALRLLPSHC PQLEQLGAPP VLPELLKSEN
GMILVTGATG SGKSTTLAAM VGYLNQHADA HILTLEDPVE YLYASQRCLI QQREIGLHCM
TFASGLRAAL REDPDVILLG ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS
FPAQEKDPVR NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH
VIQTGQQVGM ITFQQSYQHR VGEGRL
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