Gene EcHS_A3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3040 
Symbol 
ID5594283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3048054 
End bp3048833 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content54% 
IMG OID640922157 
Productputative selenate reductase subunit YgfM 
Protein accessionYP_001459659 
Protein GI157162341 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID[TIGR03312] probable selenate reductase, FAD-binding subunit 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC AATTTTTCAG GCCCGACTCT GTCGAACAGG CGCTGGAACT GAAGCGCCGC 
TACCAGGATG AAGCCGTCTG GTTCGCCGGG GGCAGCAAAC TCAATGCTAC ACCAACCCGT
ACCGATAAAA AGATTGCCAT TTCCTTACAG GATCTGGAAC TGGACTGGGT TGACTGGGAT
AACGGTGCAC TGCGGATTGG CGCAATGTCT CGCTTGCAGC CACTGCGTGA TGCGCGATTT
ATTCCTGCAG CGCTGCGTGA AGCCCTCGGT TTTGTTTACT CACGCCATGT TCGTAATCAG
TCGACCATTG GTGGTGAAAT CGCCGCCCGC CAGGAAGAGT CGGTGCTGCT TCCCGTCCTG
TTGGCACTGG ATGCTGAACT GGTTTTTGGC AACGGCGAAA CGCTGTCAAT CGAGGACTAC
CTAGCCTGCC CATGCGATCG CCTGCTAACC GAAATTATCA TTAAAGATCC GTATCGCACC
TGTGCGACCC GCAAAATTAG CCGTTCTCAG GCAGGTTTAA CCGTCGTGAC GGCAGCCGTT
GCAATGACAG ACCACGACGG TATGCGAATT GCGCTGGATG GCGTCGCCAG TAAAGCACTG
CGTCTGCACG ATGTCGAAAA ACAAAATCTG GAAGGCAATG CACTTGAACA GGCTGTCGCC
AACGCCATTT TCCCGCAGGA AGATTTGCGG GGCAGCGTGG CCTATAAACG CTATATCACG
GGAGTTCTGG TAGCCGACCT GTATGCCGAC TGCCAACAGG CTGGGGAGGA AGCCGTATGA
 
Protein sequence
MIEQFFRPDS VEQALELKRR YQDEAVWFAG GSKLNATPTR TDKKIAISLQ DLELDWVDWD 
NGALRIGAMS RLQPLRDARF IPAALREALG FVYSRHVRNQ STIGGEIAAR QEESVLLPVL
LALDAELVFG NGETLSIEDY LACPCDRLLT EIIIKDPYRT CATRKISRSQ AGLTVVTAAV
AMTDHDGMRI ALDGVASKAL RLHDVEKQNL EGNALEQAVA NAIFPQEDLR GSVAYKRYIT
GVLVADLYAD CQQAGEEAV