| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3016 |
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| Symbol | epaR |
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| ID | 5593752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3020645 |
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| End bp | 3021412 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640922133 |
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| Product | type III secretion apparatus protein EpaR |
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| Protein accession | YP_001459636 |
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| Protein GI | 157162318 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0000240675 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGGAGG CGATACTCTA TCAGTTGCAT AGTCTGCTGG CTGCTACAGC GCTCGGTTTT
TGCCGATTGG CACCAACTTT CTATTTGTTA CCATTTTTCG CCAGTGGGAA TATACCAACA
GTAGTCCGTC ATCCAATAAT AATAGTGGTA TCATGTGCAT TAGTTCAGCA TTACCACTAT
GAATTATCGA CCTTAAATGA AATCGATATC GCTTTGTTTG CTGCCAGAGA AATTATCATA
GGGCTGTTCA TTGCTTGCTT ATTATCATCC CCGTTTTGGA TTTTCCTTGC TATAGGTAGT
TTTATCGATA ACCAACGTGG TGCAACGTTA AGTAGTACTT TGGATCCTGC TACAGGTGTC
GATACTTCGG AATTAGCAAG ATTATTTAAC CTATTCTCTG CAGCGGTTTA TCTTACTAAC
GGTGGATTGA ACTTTATTCT GGAAACTCTT TGGCAAAGTT ATAATTTATG GCCTTCAGGC
AATTTTAATT TTCCTAAATT AGAGCCTTTA TTCTCATATA TTAATAACAT AATGACTCAT
ACTATCGTTT ACGCAAGTCC CGTGATTGCC GTTATGCTGG GCGGTGAGGC TGTCCTGGGA
TTGCTGGCAC GTTATGCTTC ACAACTAAAT GCTTTTGCCA TTTCACTGAC TGTCAAAAGT
GCGCTGGCAT TTTTAATATT AATTATTTAT TTTGGCCCAA TACTGGCTGA ACGAGTAATG
CCGTTATCCT TTTTCCCAGA ACAATTGCAA CTATACATTG AGAAATAG
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| Protein sequence | MGEAILYQLH SLLAATALGF CRLAPTFYLL PFFASGNIPT VVRHPIIIVV SCALVQHYHY
ELSTLNEIDI ALFAAREIII GLFIACLLSS PFWIFLAIGS FIDNQRGATL SSTLDPATGV
DTSELARLFN LFSAAVYLTN GGLNFILETL WQSYNLWPSG NFNFPKLEPL FSYINNIMTH
TIVYASPVIA VMLGGEAVLG LLARYASQLN AFAISLTVKS ALAFLILIIY FGPILAERVM
PLSFFPEQLQ LYIEK
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