| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3010 |
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| Symbol | eprI |
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| ID | 5594816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3016968 |
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| End bp | 3017183 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640922128 |
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| Product | type III secretion apparatus needle protein |
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| Protein accession | YP_001459631 |
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| Protein GI | 157162313 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02105] type III secretion apparatus needle protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00000110962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATCA GCAAACAATT TGATCAGGGC GTTGATGATC TGAACCAGCA AGTTGAAAAA
GCGTTGGAGG TTTTAGCAAC CAATCCCTCC GACCCGAAAT TTCTTGCCGA ATATCAAAGT
GCATTAGCTG AGTATACATT ATATCGAAAT GCGCAATCTA ACGTTGTAAA AGCGTATAAA
GATCTTGATT CAGCAATCAT ACAAAACTTC CGCTAA
|
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| Protein sequence | MDISKQFDQG VDDLNQQVEK ALEVLATNPS DPKFLAEYQS ALAEYTLYRN AQSNVVKAYK
DLDSAIIQNF R
|
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