Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2490 |
Symbol | |
ID | 5593696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2496701 |
End bp | 2497264 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640921611 |
Product | fimbrial protein |
Protein accession | YP_001459145 |
Protein GI | 157161827 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGT TTGTTAAAAC AGCTATTGCT GCGGCAATGG TGATGGGCGT GTTCACCTCT ACGGCAACAA TCGCTGCGGG TAACAACGGT ACTGCACGTT TTTACGGCAC CATTGAAGAC TCAGTGTGTT CTATCGTTCC GGACGATCAC AAACTGGAAG TTGATATGGG TGATATCGGT GCCGAAAAAC TGAAAAATAA CGGCACCACC ACGCCGAAAA GTTTCCAGAT TCGTCTGCAA GATTGCGTAT TTGATACTCA GGAAACAATG ACCACTACCT TTACTGGTAC CGTTTCTTCT GCAAATAGCG GCAATTATTA CACCATTTTC AATACCGATA CCGGTGCGGC ATTTAACAAT GTTAGCCTGG CGATCGGTGA CTCTCTGGGT ACCTCTTACA AAAGCGGCAT GGGTATTGAC CAGAAAATAG TGAAAGACAC TTCTACTAAT AAAGGCAAAG CGAAGCAGAC ACTGAACTTT AAAGCCTGGC TGGTCGGCGC AGCTGATGCG CCAGATCTGG GTAATTTCGA AGCAAATACC ACCTTCCAGA TTACTTACCT GTAA
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Protein sequence | MSKFVKTAIA AAMVMGVFTS TATIAAGNNG TARFYGTIED SVCSIVPDDH KLEVDMGDIG AEKLKNNGTT TPKSFQIRLQ DCVFDTQETM TTTFTGTVSS ANSGNYYTIF NTDTGAAFNN VSLAIGDSLG TSYKSGMGID QKIVKDTSTN KGKAKQTLNF KAWLVGAADA PDLGNFEANT TFQITYL
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